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Name : PSPTO_1420 (PSPTO_1420) Accession : NP_791246.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : RNA methyltransferase, TrmH family, group 1 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 1560768 - 1561541 bp Length : 774 bp Strand : + Note : see PMID:20190049 for expression data DNA sequence : TTGTTGCAGAACATCCGTGTTGTCCTGGTCGGCACTACCCATCCCGGAAATATCGGCGGTGCCGCTCGCGCCATGAAAAA CATGGGTCTCACGCGTCTGGTACTGGTCGATCCTCGTATCTTTCCTTCGCCCGATGCCGATGCACGGGCGTCGGGCGCCA CCGATATTCTCGAAGGCGCGCAGGTTGTTGCGACCCTTGAAGAGGCTTTGGTCGGCTGTCGTCTGGTGCTCGGCACCAGT GCGCGTGATCGCAGTCTGCCGTGGCCGTTGCTTGATCCGCGGGCGTCCGGTGAGAAAGTCATCGAGCAGGCCGGGGAGGG CGCTGAAGTGGCGCTGGTCTTTGGTCGCGAGCATGCCGGCCTGACCAACGAAGAACTGCAGCGCTGTCACTTCCATGTGC ACATTCCGTCGGACCCCACGTTCAGCTCGCTCAACCTCGCCGCTGCCGTGCAAGTGCTCAGCTATGAGGTGCGCATGGCC TGGCTGGCGGCTTCAGTGCAGGCAGACGAGGGCGAAACGCCCAAGGTCGCGTCGGCGCATAACGCCGAGCTGGCGACGAT GGATGAGATGGAAGGTTTCTATGGTCATCTGGAAACCACGCTGGTGAACATCGGCTTCCTTGACCCGGAAAAGCCGCGGC ACCTGATGGCGCGGCTGCGCAGGCTGTTCGGTCGCAGTGAAGTGGAGCGCTCCGAGCTGAGTATTCTGCGCGGCGTCCTG ACCGAAACCCAGAAAGCCGCACGCGGTGAACCCTACAAGCGGAAGGACCAGTAA Protein sequence : MLQNIRVVLVGTTHPGNIGGAARAMKNMGLTRLVLVDPRIFPSPDADARASGATDILEGAQVVATLEEALVGCRLVLGTS ARDRSLPWPLLDPRASGEKVIEQAGEGAEVALVFGREHAGLTNEELQRCHFHVHIPSDPTFSSLNLAAAVQVLSYEVRMA WLAASVQADEGETPKVASAHNAELATMDEMEGFYGHLETTLVNIGFLDPEKPRHLMARLRRLFGRSEVERSELSILRGVL TETQKAARGEPYKRKDQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 4e-111 | 92 |
