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Name : glcD (PSPTO_3555) Accession : NP_793335.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 4011746 - 4013245 bp Length : 1500 bp Strand : + Note : similar to SP:P52075, SP:P32718, PID:396419, GB:U00096, and PID:1790522; identified by sequence similarity; putative DNA sequence : ATGAATATTCTCTACAACGAACGCATTGACGGCGTGCTGCCCGCTGTCGACAAGCAGCAATTGCTCGATGAGCTGCGACG CCAATTGCCCGACCTGGACGTATTGCACCGCACCGAAGAGCTGCGGCCTTACGAGTGCGACGGGTTGTCGGCTTACCGCA CCACGCCGATGCTGGTGGTGTTGCCGCGCCACCTTGAAGAGGTGCAGACGCTGCTGCGGCTGTGCCACGCGCATCGCGTG CCAGTGGTTGCACGCGGTGCGGGCACCGGCTTGTCGGGTGGCGCGCTGCCGCTGGAAAAAGGCGTTCTGCTGGTGATGGC GCGCTTCAACCAGATCCTCGCTATTGATCCAGCCGCACGCGTGGCACGGGTCCAGCCCGGCGTGCGCAACCTGGCCATTT CCCAGGCAGCTGCGCCTCACGGGCTTTATTATGCCCCCGACCCGTCCTCGCAAATTGCCTGCTCTATCGGTGGCAACGTG GCGGAAAACGCGGGCGGCGTGCACTGCCTCAAATACGGCCTGACCGTGCACAACCTGCTCAAAGTCGAGATCCTCACCGT CGAAGGCGAGGCCATGACGCTGGGCAGCGATACGCTGGATTCACCGGGCTTCGACCTGCTGGCCTTGTTCACCGGCTCCG AAGGCATGCTCGGGATCATCACCGAAGTCACGGTCAAGCTGCTGCCCCGACCGCAGGTGGCCAAAGTGCTGCTCGCCGCC TTTGATTCGGTGGAAAAAGCCGGGCGAGCGGTGGCCGATATCATCGCGGCGGGCATTATTCCCGGCGGGCTGGAAATGAT GGACAACCTGGCGATTCGCGCCGCCGAAGACTTCATCCACGCGGGCTACCCGGTCGATGCCGAAGCGATCCTGCTGTGCG AGCTTGACGGCGTCGAAGCCGATGTCCATGCCGATTGCGAGCGGGTTCGCGAGGTGCTCACACAGGCGGGCGCGACCGAA GTACGCCAGGCGATAGACGAGGCCGAACGGGTGCGTTTCTGGGCCGGGCGCAAGAACGCTTTCCCCGCCGTTGGCCGCCT GTCGCCGGATTACTACTGCATGGACGGGACCATTCCGCGCCGTGCATTGCCGGGGGTGCTGCGCGGCATCAGCGAACTCT CCGGGCAATACGGCCTGCGAGTCGCCAATGTGTTTCATGCCGGCGATGGCAACATGCACCCGTTGATCCTGTTCGACGCC AATCAACCCGGAGAACTGCAGCGCGCCGAGGCGCTGGGCGGCAAGATTCTGGAACTGTGTGTCGAAGTGGGCGGCAGCAT CACCGGCGAACACGGCGTTGGCCGCGAGAAAATCAATCAGATGTGCGCGCAATTCAACAGCGACGAACTGACCTTTTTTC ATGCCATCAAGGCGGCATTCGACGCCAGCGGCATGCTCAACCCCGGCAAGAACATCCCGACCCTGCAGCGCTGCGCGGAG TTCGGCGCGATGCACATCCACGCAGGCCAGTTGCCCTTCCCTGAACTGGAGCGCTTTTGA Protein sequence : MNILYNERIDGVLPAVDKQQLLDELRRQLPDLDVLHRTEELRPYECDGLSAYRTTPMLVVLPRHLEEVQTLLRLCHAHRV PVVARGAGTGLSGGALPLEKGVLLVMARFNQILAIDPAARVARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLKVEILTVEGEAMTLGSDTLDSPGFDLLALFTGSEGMLGIITEVTVKLLPRPQVAKVLLAA FDSVEKAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVDAEAILLCELDGVEADVHADCERVREVLTQAGATE VRQAIDEAERVRFWAGRKNAFPAVGRLSPDYYCMDGTIPRRALPGVLRGISELSGQYGLRVANVFHAGDGNMHPLILFDA NQPGELQRAEALGGKILELCVEVGGSITGEHGVGREKINQMCAQFNSDELTFFHAIKAAFDASGMLNPGKNIPTLQRCAE FGAMHIHAGQLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 0.0 | 81 |
