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Name : glcB-2 (PSPTO_3559) Accession : NP_793338.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : malate synthase G Function : - COG functional category : C : Energy production and conversion COG ID : COG2225 EC number : - Position : 4016048 - 4018225 bp Length : 2178 bp Strand : + Note : identified by match to PFAM protein family HMM PF01274 DNA sequence : ATGACCGATTTCGTCAAATGCCAACGCCTCAAGGTAGCCGTCAAGCTGCAACGTTTTGTCGATGAAGAAGTGCTGCCCGG CACCGGGCTGGAGCCAGAGGCATTCTGGAAAGGCTTCGATGCGCTGGTTCATGACCTTGCGCCAGTCAATCGCGAACTGC TCGCCGAACGTGAGCGTTTGCAGGGCCAACTGGACAAATGGCACAAGGCGCATCCCGGACCAATCACCGACATGCCCGCC TACCGTGCGTTTCTGCACTCGATTGGCTACCTGCAGCCCGTGCCGGAACACGTTGCAGCCACTACCGCCAATGTCGATCT GGAAATCAGCGAGCAGGCTGGCCCGCAACTGGTGGTGCCCGCCAGCAACGCACGCTATGCGCTGAATGCTGCCAATGCGC GCTGGGGCTCGCTGTACGACGCGCTGTATGGCACCGACGTGATCTCGACCAGCAACGGCGCTGAAATCCGCGCCGGGTAC AATCCGCTGCGCGGCGCCAAGGTCATCGCGTTTGCCCGCGAGCTGCTCGACACCAGTGCGCCCCTTGCTAACGGCAGCCA TAGCGACGCAAACCGCTATCGCATTGAAGATGGCGAGCTGCGCATCACCCTGGCGGATGGCAGTCAGACGCTTCTGCAAC ACCCGGAAAAATACGTCGGTTTCACAGGTGAGCCTGACCAGCCACAGGCGATTCTGCTCAAGAATCATGGTCTGCACATC GAAATCCAATTCGATCCGCAGCATCCGGTCGGCAAGACCGATGCCGCCGGCATCAAGGACCTGCTGCTGGAATCGGCTCT GTCGACCATCGTCGACTGCGAAGACTCGGTCGCCGCCGTTGACGCTGACGACAAGGTGCTGGTCTACCGCAACTGGCTGG GCCTGATGAAAGGCGACCTGACCGAAACCCTCGACAAGGGCGGCAAAGCCATCACCCGCAGCCTCAACCCCGACCGCGTT TACCACGCCGCAGCCGGTGGTGAACTGACGCTGCGCGGTCGCTCGCTGCTGTTGATTCGCAACGTCGGCCACCTGATGAG CAACCCGGCGATTGTCGACCAGGACGACAAGGAGATTCCCGAGGGCATTCTCGACGGCGTGATCACCAGCCTGATCGGCC TGCACGACCTGACCCGGCATGGCAACTCGCGCGCCGGGAGCATTTACATCGTCAAACCGAAAATGCACGGCGCGGCCGAA GTGGCGTTTGCCGACCAGTTGTTCAGCCGCATCGAGGACGTGCTGCACCTGCCACGCAACACCTTGAAGATGGGCATCAT GGACGAAGAGCGACGCACCAGCGTCAACCTCAAGGCCTGTATCAATGCGGCGTCTGCTCGGGTCGCGTTCATCAACACCG GTTTTCTCGACCGTACCGGCGATGAAATTCACAGCGCCATGCAGGCAGGCCCTGTGCTGCGCAAGGGCGAGATGAAAAAC ACGCCGTGGATCAAGGCCTACGAGCGCAACAATGTGCAGGTCGGCCTGGCCTGCGGCTTGCGCGGCAGGGCGCAGATAGG CAAGGGCATGTGGGCGATGCCCGATCGCATGGCCGACATGCTGGAGCAGAAAATCGCTCATCCGAAATCAGGCGCGACCA CCGCTTGGGTGCCTTCGCCGACTGCCGCCACACTGCATGCGTGGCATTACCATCATGTCGATGTGCGTCAGGTTCAGGAG CAACTCGAGCAACAGTCACTGGTCGATGTCAGCGATCAGTGGCTCGACGACCTGCTGACCATTCCCGTGGTGGGCAAACC CGAGTGGACACGCGAACAGATTCTCGAAGAACTGGAAAATAACACCCAGGGCCTGCTGGGCTATGTTGTACGCTGGGTGG AGCAAGGTATCGGCTGCTCCAAGGTGCCGGATATCCATAACGTCGGGCTGATGGAAGACCGGGCGACCCTGCGCATCTCC AGCCAGCACATGGCCAACTGGTTGCTGCACGACATCGCAGGCAAGGAAGACATACAAAATGTGCTGGAGCGCATGGCCAA AGTGGTGGACAAGCAGAATGCCGGGGATTCGCACTACCGGCCGATGACCAGGGACTTCAAGAACTCCGCCGCCTTCAAGG CCGCCTGCGCGCTGGTATTCAAAGGCACGGAGCAGCCTTCGGGCTACACCGAGCCCCTGCTGCATGAGTCCCGGCTTGCG TTCAAGGATGCCCACTGA Protein sequence : MTDFVKCQRLKVAVKLQRFVDEEVLPGTGLEPEAFWKGFDALVHDLAPVNRELLAERERLQGQLDKWHKAHPGPITDMPA YRAFLHSIGYLQPVPEHVAATTANVDLEISEQAGPQLVVPASNARYALNAANARWGSLYDALYGTDVISTSNGAEIRAGY NPLRGAKVIAFARELLDTSAPLANGSHSDANRYRIEDGELRITLADGSQTLLQHPEKYVGFTGEPDQPQAILLKNHGLHI EIQFDPQHPVGKTDAAGIKDLLLESALSTIVDCEDSVAAVDADDKVLVYRNWLGLMKGDLTETLDKGGKAITRSLNPDRV YHAAAGGELTLRGRSLLLIRNVGHLMSNPAIVDQDDKEIPEGILDGVITSLIGLHDLTRHGNSRAGSIYIVKPKMHGAAE VAFADQLFSRIEDVLHLPRNTLKMGIMDEERRTSVNLKACINAASARVAFINTGFLDRTGDEIHSAMQAGPVLRKGEMKN TPWIKAYERNNVQVGLACGLRGRAQIGKGMWAMPDRMADMLEQKIAHPKSGATTAWVPSPTAATLHAWHYHHVDVRQVQE QLEQQSLVDVSDQWLDDLLTIPVVGKPEWTREQILEELENNTQGLLGYVVRWVEQGIGCSKVPDIHNVGLMEDRATLRIS SQHMANWLLHDIAGKEDIQNVLERMAKVVDKQNAGDSHYRPMTRDFKNSAAFKAACALVFKGTEQPSGYTEPLLHESRLA FKDAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcB | CAE85241.1 | GlcB protein, malate synthase G | Not tested | PAI V 536 | Protein | 0.0 | 63 |
