Gene Information

Name : PSPTO_3600 (PSPTO_3600)
Accession : NP_793379.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Virulence
Product : oxidoreductase, molybdopterin-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2041
EC number : -
Position : 4060605 - 4061252 bp
Length : 648 bp
Strand : -
Note : see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00174

DNA sequence :
ATGCTCACCGGCTGTAATCTGCAGGACGGTGATCAGGTGGACAAGGTGCTGTGGGCCATGTCGCGCTGGAACGACCGGGT
TCAGGCCTGGCTGTTCAACGGCCAGAAACTGGCCCCGACTTATACCAAGGCGCAGTTGACCAACCCGTTCCCGTTCAATG
CGTTTTACCCTGAATACAACGTGCCTGAGCTGGAGCTTGCCGAGTATCGGCTGGCGGTGTCCGGGCTGGTACGCGACAAG
CAGCCGTGGACGATAGACGCGCTGCGCAAATTGCCGCAACGCACGGACATCACGCGGCTGATCTGCATTGAAGGCTGGAG
CGCGATAGGGCAGTGGGGCGGTGTGCCGCTGAAAACGTTTCTGGAGTACATCGGAGCGGATACTACGGCGCGCTTCGTCG
GCTTCAAGTGCGCCGACCGCTATTACTCAAGTTTGGACATGCCCACCGCGCTGCACCCGCAGACCCTGCTGGCGCTGGAC
TTCGGCGAAGTCGCGCTGCCTCCGGACTACGGTTACCCGCTGCGCGTGCGGGTGCCGACCAAACTGGGCTTCAAGAACCC
CAAGCACATCGTCGAGATTTTCGTCAGTAACGAAAACCCCGGCGGGTACTGGGAAGATCAGGGCTACAACTGGTTCAGCG
GGATCTAG

Protein sequence :
MLTGCNLQDGDQVDKVLWAMSRWNDRVQAWLFNGQKLAPTYTKAQLTNPFPFNAFYPEYNVPELELAEYRLAVSGLVRDK
QPWTIDALRKLPQRTDITRLICIEGWSAIGQWGGVPLKTFLEYIGADTTARFVGFKCADRYYSSLDMPTALHPQTLLALD
FGEVALPPDYGYPLRVRVPTKLGFKNPKHIVEIFVSNENPGGYWEDQGYNWFSGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42042.1 hypothetical protein Not tested PAI II 536 Protein 5e-62 54
c3567 NP_755442.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-58 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_3600 NP_793379.1 oxidoreductase, molybdopterin-binding protein VFG1561 Protein 2e-62 54
PSPTO_3600 NP_793379.1 oxidoreductase, molybdopterin-binding protein VFG1704 Protein 2e-58 52