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Name : ccmF (PSPTO_3630) Accession : NP_793406.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 4090581 - 4092554 bp Length : 1974 bp Strand : - Note : - DNA sequence : ATGATTCCCGAACTCGGCCATCTGGCCATGATTCTGGCGTTGGGTTTTGCGCTGGTGCAGGCCATCGTCCCGCTGATCGG TGCGTGGCGTGGCGACCGCTTGTGGATGAGCCTGGCGCGTCCAGCGGCGTGGGGCCAGTTCAGCTTTCTGATCTTCGCCT TCGGTTGCCTGACCTACGCGTTCATGACCGATGATTTTTCCGTTACCTATGTGGCGCAGAATTCCAACACCGCGCTGCCC TGGTACTACAAGTTCAGCGCCGTGTGGGGCGCGCATGAAGGCTCGTTGCTGCTCTGGGCGTTGATTCTCGGTGGCTGGAC CTTCGCGGTGTCGGTGTTTTCCCGGCAACTGCCACAGGTGATGCTGGCGCGGGTACTGGCCGTGATGGGCATGATCAGCC TGGGCTTTTTGCTGTTTCTGATCCTCACGTCCAACCCGTTTGCCCGCCTGCTGCCGCAAATGCCTGCCAACGGGCGCGAT CTCAACCCGTTGTTGCAGGATATCGGCCTGATCGTGCATCCGCCGATGCTGTACATGGGCTATGTGGGGTTTTCCGTAGC CTTTGCGTTTGCCATTGCGGCGCTGCTCGGCGGGCGACTCGACGCTGCCTGGGCGCGCTGGTCGCGACCCTGGACACTGG TGGCCTGGGCGTTTCTCGGCATCGGCATCAGCCTTGGCTCGTGGTGGGCGTATTACGAACTGGGCTGGGGCGGCTGGTGG TTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCCTGGCTGGTGGGCACGGCGCTGATTCATTCGCTGGCGGTCACGGA AAAACGCGGCGTGTTCAAGAGCTGGACGGTGCTGCTGGCAATTGCGGCGTTTTCCCTGAGCCTGCTGGGCACGTTTCTGG TGCGTTCCGGGGTGCTGACGTCGGTACACGCTTTCGCCTCGGACCCGGCACGCGGCGTGTTCATTCTGATGTTCCTGCTG GTTGTGGTGGGCGGCTCGCTGACCCTGTTCGCGATTCGTGCGCCGGTGGTGAAAAGCCACGTCGGCTTTGGCCTGTGGTC GCGGGAAACCTTGCTGCTCGGCAATAACCTGTTGCTGGTGGTGGCCGCGTCGATGATCCTGCTCGGCACGCTTTATCCGC TGGTGATCGACGCCATCAGCGGCGACAAGATGTCGGTCGGTCCGCCGTATTTCAACGCGCTGTTCGTGCCGTTGATGGGG CTGTTGCTGGCAGTCATGGCGGTCGGTGTACTGGTGCGCTGGAAGGACACGCCGCTGAAATGGCTGCTGGGCATGCTCGC CCCGGTGCTGATCGGCAGCGCCGTGCTGGCGGTGATCGCCGGGCTGGTCATGGGCGATTTTCAGTGGGCGGTGCTGGCCA TCTTCATGCTCGCTGCCTGGGTGCTGCTGGCCGGGCTGCGCGACCTGTTTGACAAGACCCGTCACAAGGGGCTTCTCAAA GGCGCACGCAGCCTGACCCGCAGTTATTGGGGCATGCAGCTTGCGCACTTTGGCATCGTGGTGTGCGCGCTGGGCGTGGT GCTATCCAGCCAGAACAGCGCCGAGCGCGATTTGCGCATGGCCCCGGGTGAGTCCACCGAGCTGGGCGGTTATGTGTTTG TGTTCGAGGGCGCGAAGCATTATGAAGGGCCCAATTTCACCTCGGATCGTGGCACCGTTCGCGTCCTGCGTAACGGCGTG CAGCTCACTGAACTGCACCCGGAGAAACGCCTTTACAGCGTGCAGCAATCAATGATGACCGAGGCGGGCATCGACGCCGG TTTCAGCCGCGATCTTTACGTGGCCTTGGGCGAACCGCTGGGCAATGGCGCCTGGGCGGTGCGGGTTCACGTCAAACCGT TCGTGCGCTGGATCTGGTTCGGCGGCTTGCTGACCGGTCTTGGCGGGGTGCTGGCGGCGCTGGACCGGCGTTATCGCACG CGGGTCAAAACCAGAGTGCGTGAGGCGCTTGGCCTGTCGGGAGCTGCGCGATGA Protein sequence : MIPELGHLAMILALGFALVQAIVPLIGAWRGDRLWMSLARPAAWGQFSFLIFAFGCLTYAFMTDDFSVTYVAQNSNTALP WYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISLGFLLFLILTSNPFARLLPQMPANGRD LNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTLVAWAFLGIGISLGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPARGVFILMFLL VVVGGSLTLFAIRAPVVKSHVGFGLWSRETLLLGNNLLLVVAASMILLGTLYPLVIDAISGDKMSVGPPYFNALFVPLMG LLLAVMAVGVLVRWKDTPLKWLLGMLAPVLIGSAVLAVIAGLVMGDFQWAVLAIFMLAAWVLLAGLRDLFDKTRHKGLLK GARSLTRSYWGMQLAHFGIVVCALGVVLSSQNSAERDLRMAPGESTELGGYVFVFEGAKHYEGPNFTSDRGTVRVLRNGV QLTELHPEKRLYSVQQSMMTEAGIDAGFSRDLYVALGEPLGNGAWAVRVHVKPFVRWIWFGGLLTGLGGVLAALDRRYRT RVKTRVREALGLSGAAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-140 | 58 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-124 | 56 |
