Gene Information

Name : capB (PSPTO_4145)
Accession : NP_793906.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : cold shock protein CapB
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 4672279 - 4672488 bp
Length : 210 bp
Strand : +
Note : similar to GP:13625473, and SP:P80415; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:13625473, and SP:P80415, identified by sequence similarity, putative

DNA sequence : 
ATGTCCAATCGCCAAACTGGTACCGTTAAGTGGTTCAACGATGAAAAAGGCTTCGGCTTCATCACTCCACAATCCGGTGA
CGACCTGTTCGTGCACTTCAAAGCTATCCAATCCGACGGCTTCAAAAGCCTGAAAGAAGGCCAACAGGTTTCTTTCATCG
CTACCCGCGGTCAGAAAGGCATGCAAGCTGAAGAAGTTCAAGTTATCTAA

Protein sequence : 
MSNRQTGTVKWFNDEKGFGFITPQSGDDLFVHFKAIQSDGFKSLKEGQQVSFIATRGQKGMQAEEVQVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-15 59