Gene Information

Name : PSPTO_0939 (PSPTO_0939)
Accession : NP_790778.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : HAD-superfamily hydrolase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0560
EC number : -
Position : 1017283 - 1017960 bp
Length : 678 bp
Strand : +
Note : see PMID:20190049 for expression data; similar to SP:O87707; identified by sequence similarity; putative

DNA sequence :
GTGGAACAACGCTTGCTGGCGGTGTTCGATTTCGATGGGACGATTACCCGGCACGACAGCTTTGTTCCGTTTCTCAAGTT
CGCCTTCGGGCAACGTGTTTTCTCCGTACGCATGGCGCGGCTGGTGCTGCCCAGCCTTGGCTACCTGACCAAGCGCCTGA
GCCGTGACGAACTCAAAGGCCGGCTGATCAAGGCTTTTCTGAGCGGCGTTGAAGTGCAGTGGCTGCAACAGAAGGCCGAA
GCCTTCTGCCATTCGCACTGGAAACGCCTGATGCGCCCTGCTGCGCTTGAGTCCATCGCGGCTGAAATCGAAAAGGGTGC
CATTGTCACGCTTTGTTCAGCATCGCCTGCTATGGTCCTGCAACCCTTCGCTGATCGCTTGAAAGTGGAGCTGATCGGCA
CCAATCTGGAAGTCATCGACGGCAAGTTGACCGGCTTGATCGAGGGCAGTAATTGCCGTTGCGACTCCAAGGTGGCGCGT
CTTGAAAGCGTTTACGGGCCGCTGACGCAGTTCCGGGTTCGCGCCTGGGGCGACACGCGAGGTGATCACGAATTGCTTGC
CGCTGCTCAGGATGCGCACTGGCGATTGTTCCATCCGACGTGGCGTCGAGGCCGTTATAAAGGCCCCGTTAACGCCAAGT
TACACAATCCTGATGGCAAAGACGGGCCAACACGGTAA

Protein sequence :
MEQRLLAVFDFDGTITRHDSFVPFLKFAFGQRVFSVRMARLVLPSLGYLTKRLSRDELKGRLIKAFLSGVEVQWLQQKAE
AFCHSHWKRLMRPAALESIAAEIEKGAIVTLCSASPAMVLQPFADRLKVELIGTNLEVIDGKLTGLIEGSNCRCDSKVAR
LESVYGPLTQFRVRAWGDTRGDHELLAAAQDAHWRLFHPTWRRGRYKGPVNAKLHNPDGKDGPTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACY75547.1 HAD-superfamily hydrolase subfamily IB Not tested Tn6060 Protein 6e-71 63