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Name : VP1392 (VP1392) Accession : NP_797771.1 Strain : Genome accession: NC_004603 Putative virulence/resistance : Virulence Product : ClpA/B-type protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1492844 - 1495516 bp Length : 2673 bp Strand : - Note : similar to GB:AAG05051.1 (AE004594) percent identity 51 in 894 aa DNA sequence : ATGATAAATATAAACCTTTCTTCATTAATTCAGCGTCTACACCCGATAGCTAAAGTAGCATTAGAAGATGCCGCAGCACT CGCAGTCTCGGAAAAAGCAAACGAAGTTCAAATTGAGCATTATTTACTGAGTCTATTAGAAAGGCCAAATAGTGATTTTG ACGTCTTATTAAGTCATTTTGATTGTTCTGAGAACTTATTGAGACAATCGGTTCGATCCACACTCGATACCAACGCCAAA GGAAATGGCAGCAAACCTGTTTTTTCTGCTTTATTAATCGAATGGTTACAAGAAAGCTGGCTGGTTTCTTCTTTAGATCT ATCCGAAACACAAATCCGCTCTGGCGCCCTACTCCTTACTCTTGTTAGCAACCCTCTGCGTTATGGCCAACATGGTTACG CCTCTATTCTTGAAGCAGTAAACCCTGATAGCCTTAAACGTAACTTTGCAGAACTAACAAGCCACTCTATTGAGGCGCAA GTCGCGACTTCAGAGAAAACACAAGCTCGTGAAGATGGTTCAGCACTGAGCAAGTTCACGACAGACTTCACTGGTAAAGC ACGCAAAGGCGAAATCGATCCTGTTTTCTGCCGTGACCAAGAAATCCGCCAAATTGTAGACATTCTTGCTCGTCGCCGTA AAAACAACCCTATTGCCGTTGGTGAGCCGGGCGTTGGTAAAACCGCAGTAGTAGAAGGCTTGGCACTTAAGATTGTACAA GGTGACGTACCAGACAACCTTAAAGGTGTTGAGCTTTACGGCTTGGACATGGGTCTTCTGCAAGCTGGCGCAAGCGTAAA AGGCGAATTCGAAAAACGCCTAAATGCAGTATTGGATGAAGTGAAAAACTCGCCAACACCGATCATCTTGTTCATCGATG AAGCGCACACCCTTGTTGGCGGCGGCAACCAAGCGGGCGGTAGCGATGCTGCTAACTTATTAAAACCTGCCCTAGCACGT GGTGAAGTAAAGACAATCGCAGCAACAACATGGTCGGAATACAAAAAGTACTTTGAGAAAGATCCAGCTCTTGCGCGTCG TTTCCAACTGGTGAAACTCGACGAACCGTCTCCTGAGCAAGCAGCATTGATCATTCGTGGTCTGCGCCCGGCGTACGAGA AATCTCACAATGTTTACGTACGTGACGACGCTATCACCGCAGCGGCAGCGCTTTCTGCTCGATACATCTCTGGTCGCCAA CTGCCAGACAAAGCGATCGATGTACTAGATACGGCATGTGCACGAGTGAACATCAGCCTTAATGCCATTCCTGCTTCTGT TGAGACTCTTCAGCAAGAACTTGCAGCTCAACAGCGCGAGCTTGAAGCGCTTGAGCGTGATGCTCTGCAGCAAACTGGCG ACAAGCACAGCCTTGCTAACATTCCAGACCTAAAATTGGCAATGGAAACGACAAAAGAAGAGCTAGCAGAACAAGAAGTG CAATGGCACAAAGAAAAAGAGCAGATCCAAGAGATGATTGCTCTACGCTCTCGCTTACATGAACTGGTCTTTGGCAAAGT AAATGAAGAAGAGCTTGTTGTAGACGAAGATTCAGAACAAGACGTTTCTCCATATACAGAAATGGATGAAGAAGCGGTCC GCATTGCGATTTCAGCATGCCAAGAACAGTTAGACGCAATCCGCAATGGCAACCCATTAGTTCACTTTGAAGTTGGGCCA GATGAAGTCAGCCACGTTATCTCAGACTGGACTGGCATTCCAATGGGTAAGATGCTTCAAGACGAAGCAGAAACCACGCT AAAACTGAAAGAAAGCCTAACACAAAGCATCAAAGGCCAAGAATACGCTATCGATGCACTGTCTGAAGGCATTCAAACCG CAAAAGCTGGCTTGGGTAATCCAGACGCACCGACAGGCGTATTCCTGCTAGTTGGCCCAAGTGGCGTGGGTAAAACCGAA ACTGCTCGTGCGATCGCTGATCAAATGTTTGGTGGTGAGCGCTTTATGACGACCATTAACATGTCTGAGTTCCAAGAGAA GCACACGGTATCTCGCCTAATCGGTTCGCCTCCTGGTTACGTAGGTTACGGTGAAGGCGGCATGCTGACAGAAGCGGTAC GTCAGCGTCCATATTCTGTTGTACTTCTTGATGAAGTAGAAAAAGCCGATCCAGAAGTGTTGAACCTGTTCTACCAAGTG TTCGACAAAGGTACGCTGAACGACGGCGAAGGCCGCACCATCGACTTCAAGAACACGCTGATCATCATGACCAGCAACCT TGCGACGCACGAAATTGAATCTCTGGTTCACCAGTCTAAAGAAATTGATGCTAACATCATCGCAGAAGCCATCCGCCCTA CTTTGAACCAACACTTCAAGCCGGCGCTGTTGGCACGTATGTCCGTACTTCCGTTTGTGCCTCTGTCTGACGAAGCAATG ACAGAAATTATCCACCACAAACTAAACAAAGTTTCTCAGCGCCTACATAGCCATCACAAGTTGTCCCTGAGCTACGAAGA AAGCTTGGTCGAGTTCGTACTAGGTAACTGTCGCCTTGCTGAAACAGGCGCACGTAACATTGACGCGGTCATCAACCGTC AGTTACTACCTCAGCTATCGACACAGCTATTGGTGCATGATAAGGATGATTCACACACGCAAATCACAGTTTCTGTCGAT GAGCAAGGAACACTGACCTATGCGTTCAGCTAA Protein sequence : MININLSSLIQRLHPIAKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDVLLSHFDCSENLLRQSVRSTLDTNAK GNGSKPVFSALLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLRYGQHGYASILEAVNPDSLKRNFAELTSHSIEAQ VATSEKTQAREDGSALSKFTTDFTGKARKGEIDPVFCRDQEIRQIVDILARRRKNNPIAVGEPGVGKTAVVEGLALKIVQ GDVPDNLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQAGGSDAANLLKPALAR GEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSPEQAALIIRGLRPAYEKSHNVYVRDDAITAAAALSARYISGRQ LPDKAIDVLDTACARVNISLNAIPASVETLQQELAAQQRELEALERDALQQTGDKHSLANIPDLKLAMETTKEELAEQEV QWHKEKEQIQEMIALRSRLHELVFGKVNEEELVVDEDSEQDVSPYTEMDEEAVRIAISACQEQLDAIRNGNPLVHFEVGP DEVSHVISDWTGIPMGKMLQDEAETTLKLKESLTQSIKGQEYAIDALSEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTE TARAIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQV FDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQSKEIDANIIAEAIRPTLNQHFKPALLARMSVLPFVPLSDEAM TEIIHHKLNKVSQRLHSHHKLSLSYEESLVEFVLGNCRLAETGARNIDAVINRQLLPQLSTQLLVHDKDDSHTQITVSVD EQGTLTYAFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-172 | 48 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-172 | 48 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-141 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VP1392 | NP_797771.1 | ClpA/B-type protease | VFG2084 | Protein | 0.0 | 50 |
| VP1392 | NP_797771.1 | ClpA/B-type protease | VFG2076 | Protein | 9e-163 | 45 |
