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Name : VPA1028 (VPA1028) Accession : NP_800538.1 Strain : Genome accession: NC_004605 Putative virulence/resistance : Virulence Product : ClpA/B-type chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1082229 - 1084796 bp Length : 2568 bp Strand : - Note : similar to GB:AAG03480.1 (AE004447) percent identity 47 in 887 aa DNA sequence : ATGGCTTCATTATCACTTTCAGCGTTGGTCGAAAGATTGTCTCCGCAAGCGAAGGAAACGCTAGAGCAAGCGGCTGCAAT GGCAAGTTCGCGTACACATCATAGTATAGAGTTGACCCACTGGTTGTTGACGATAGTTCAACATCCATCCGGTATTTATT CAGAAGTGTTTGAAGCTTTTGATATTGATGAAAGAAAAGTCGAAGAACAACTGCAAGCTCAGCTAGAAAAATACAAAACG GGATGCCAAACCGTCCCAGGCCTTTCTGCTCATACTGTAACCATTATGCAGAATGCTTTGATGTGCGCAACGATAGAGTT TCATGAAGAACAAGTGAACTGTATCCACTTACTGTTTGCGTATCTTTCTGATGACACGCTAGTGAATATGATGAACGCTA TTAGCGCGGAGCTAGACAAAGTCGAACCATCTCGCCTAGTCGTAATGAAAGAGCATGTGGGCGATGGTGGAAACAATACT TCTAAGGCGACGAGCAGCTCGAACTCTGCATTGAATCAGTTCACAACGGATCTTACTGAGCAAGCTAAAGCTGGAAAAAT AGATCCTGTTATCGGTCGCGACAATGAAATCCGCTTGATGATCGATATCTTATTGCGTCGCCGCCAAAACAATCCGATCT TAACGGGTGAGGCAGGCGTAGGTAAAACTGCGGTAATTGAGGGGCTGGCGCAAAAAATAGTGGATGGGGATGTTCCTCCT GCTTTACATGATGTTGCCATCAAATCACTCGATCTTGCTTTGCTTCAGGCGGGTGCGGGGATGAAAGGGGAGTTTGAAAA TAGACTTAAAAATCTCATTCGAGAAGTGAACGAATCTTCGCAGCCAATCATTCTTTTTATCGATGAAGCTCATGGTCTAA TCGGAGGTGGTGGTCAAGCGGGACAAGGTGATGCTGCTAATATATTGAAACCAGCGTTGGCTCGAGGAGAGTTACGGACC ATCGCTGCAACTACTTGGGCTGAGTACAAAAAATATTTTGAAAAAGATGCTGCGTTAACGAGGCGCTTCCAGGTTGTGAA AGTAGACGAGCCGACTCCTGAGTTAGCGGTAGATATGCTTAGAGGCTTGGTTAACATCATGGGGCAACATCATGATGTCT ATATCACAAGCCAAGCACTGAATGCTGCGGTACAACTTTCTGCTCGCTACATTAACGGACGCCAACTGCCAGATAAAGCA GTATCGGTATTAGATACAGCATGTTCGCGTGTTGCATTGAGCCAATCTGCCACGCCGGGCGCGTTGGATAGCAAAAAGAA AAAGCTAAACATCAAAGAAGCTGAGTTTCAACAACTTACCAAAGAGGCTCAATTGGGCGTAAGTCACGATGAACTGCTTA ATAATATTCGGTATGAGATCGATGAGTTATCTAATCAAGTCATAGAATTAGAGGCAATTTGGGAACAAGAAAAGCAGTGG GTTCAAGAAGCTAAGTCGTTGAGAGCTAGGGTGATAGAAGAGAATGCCGACTGTGACAAAGAGCGATTACAGGAAATCGA ATCGAACTTAGCGCTCAACGCCCAACCTTTAGTCTTTTCTCATGTGAATGAATCTTTGATTGCTGAGGTGATTTCTGATT GGACAGGCATTCCACTTGGAAAATTGCAAGATGACGAAATTGAAGCGGTTCTTAACCTAAAAGATAGCTTGTGCGAGCGA GTGGTGGGGCAAGATCATGCTCTAGAAATCATGTCCGAAGTGATCAAAACAGCAAGTGCCCAATTGACGGATGAAACCAA ACCTAATGGCGTGTTTTTATTAACTGGCCCTAGTGGTGTCGGAAAAACGGAATCCGCTCTTGCTATCGCAGAGAAAGTTT ATGGGAGCGAAGACAACGTAACCACGATAAATATGTCGGAATTCAAAGAAGAGCATAAGGTTTCATTGTTGTTAGGCTCT CCACCTGGATATGTCGGATACGGTGAGGGGGGCGTTCTAACGGAAGCCGTAAGGCGTAAACCTTACAGTGTGATTCTGTT GGATGAAATGGAAAAAGCGCACCCCGGTGTGCAAGATATTTTCTATCAAGTGTTTGATAAAGGCTCCATTAAAGATGGTG AAGGTCGAGATATCGATTTTAAAAACACCATCATTATCATGACGGCGAATACTGGCACAGAAACCACAATGTCTCTCTAT GCAGATCCAGATTTAGCGCCAGAACCGGAAGCTTTAAAAGAAGCGCTTAGAGATGACTTGCTAACAGATTTTAAACCTGC ATTTTTGGGGCGGGTTAATGTATTACCTTACTTGCCTCTCGGAAAAGAAGTCCTAACGGAAATAACTAAGTTAAAACTCA ACAAAGTATCTAACCGTATCCGAAAACATTATTCGGCAGGGTTGTATTTTGATGAACAACTAATTAATGACATTGTAGAC AATAGTAATGAGTCAGGAAGTGGTGCTCGTGTAGTTCAAACCACCATTGAAAATAATTTACTTCCTAAAATTTCTCATGA AATATTGAATGCAATTCTTAATGGTAAGACGTTCGATGAAATTAATGTTAGAGGTTCAATTAAAGAACTAGAAGTCTCAC TTATTTAA Protein sequence : MASLSLSALVERLSPQAKETLEQAAAMASSRTHHSIELTHWLLTIVQHPSGIYSEVFEAFDIDERKVEEQLQAQLEKYKT GCQTVPGLSAHTVTIMQNALMCATIEFHEEQVNCIHLLFAYLSDDTLVNMMNAISAELDKVEPSRLVVMKEHVGDGGNNT SKATSSSNSALNQFTTDLTEQAKAGKIDPVIGRDNEIRLMIDILLRRRQNNPILTGEAGVGKTAVIEGLAQKIVDGDVPP ALHDVAIKSLDLALLQAGAGMKGEFENRLKNLIREVNESSQPIILFIDEAHGLIGGGGQAGQGDAANILKPALARGELRT IAATTWAEYKKYFEKDAALTRRFQVVKVDEPTPELAVDMLRGLVNIMGQHHDVYITSQALNAAVQLSARYINGRQLPDKA VSVLDTACSRVALSQSATPGALDSKKKKLNIKEAEFQQLTKEAQLGVSHDELLNNIRYEIDELSNQVIELEAIWEQEKQW VQEAKSLRARVIEENADCDKERLQEIESNLALNAQPLVFSHVNESLIAEVISDWTGIPLGKLQDDEIEAVLNLKDSLCER VVGQDHALEIMSEVIKTASAQLTDETKPNGVFLLTGPSGVGKTESALAIAEKVYGSEDNVTTINMSEFKEEHKVSLLLGS PPGYVGYGEGGVLTEAVRRKPYSVILLDEMEKAHPGVQDIFYQVFDKGSIKDGEGRDIDFKNTIIIMTANTGTETTMSLY ADPDLAPEPEALKEALRDDLLTDFKPAFLGRVNVLPYLPLGKEVLTEITKLKLNKVSNRIRKHYSAGLYFDEQLINDIVD NSNESGSGARVVQTTIENNLLPKISHEILNAILNGKTFDEINVRGSIKELEVSLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-150 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPA1028 | NP_800538.1 | ClpA/B-type chaperone | VFG2076 | Protein | 3e-169 | 47 |
| VPA1028 | NP_800538.1 | ClpA/B-type chaperone | VFG2084 | Protein | 2e-139 | 44 |
