Gene Information

Name : VPA1473 (VPA1473)
Accession : NP_800983.1
Strain :
Genome accession: NC_004605
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1572843 - 1573793 bp
Length : 951 bp
Strand : -
Note : similar to GB:AAF95969.1 (AE004349) percent identity 68 in 312 aa

DNA sequence : 
ATGGAATCTTCAATCAAAGTAGGTATCAGTTCTTGCGTGCTAGGTGAACGCGTGCGTTTCGACTCTGGTCATAAAGTCAG
TAACTTTGTAACTAAAGAGCTTAGCAATTATTTTGACTTTGTTTCTGTATGCCCAGAAGTGGGGGTAGGCATGCCAGTGC
CACGCCCGACGATTCGTTTAATCAGTAATGAAGAACGCATCGCGTTGGTTGAAACGAAAAATCCCGACAATGATCACACA
GATAACATGCTGACTTACTCCGCAAATAAAGTGGATGAGCTTCAAAATGAGCAATTGTGTGGTTATATCGTTTGTGCCAA
ATCGCCAACATGCGGTATGGAACGCGTAAAAGTGTACAGCAAAAACAACGCTGCAAAAGAAGGGGTTGGTCTTTACACGA
AAACGTTGATGGAAAAAATGCCGTGGTTACCTGTCGAAGAAGATGGACGCTTAAATGATCCCGTTCTTAAAGAGAACTTC
ATTACTCGCATTTACTGTCTCAACGATTTTTATGAATCGATGGCAGGTGAGCCGACACGCGGTAAGATCATCGATTTCCA
TTCTCGTTATAAGCTAACGCTTATGGCGCACCATCCAGAGTCGTATCGATCTTTGGGGCGCTTAGTCGCAGATGTTGCCA
GCTATGAGATTGACGAGTTTTACCGAGAATATCGATTAGGTCTGATGACGGCGCTATCGAATCGTGCCAGTCGCAAAAAC
AACACGAATGTGTTGATGCATCTTCAAGGGTATTTCAAACGCTCTCTAAACAAAGATGAAAAAGAAGAACTCGCGACCGT
GATTCAAGACTATCGTACTGGCACGCTGCCATTACTCGCGCCACTAACATTAATTAAACACTATCTAAATGCTTATCCAG
ATGAATATCTGCAAAGACAGAAGTTTTTAGAGCCACACCCGCAGGAGATGAGATTACGCTATGGTTTGTAG

Protein sequence : 
MESSIKVGISSCVLGERVRFDSGHKVSNFVTKELSNYFDFVSVCPEVGVGMPVPRPTIRLISNEERIALVETKNPDNDHT
DNMLTYSANKVDELQNEQLCGYIVCAKSPTCGMERVKVYSKNNAAKEGVGLYTKTLMEKMPWLPVEEDGRLNDPVLKENF
ITRIYCLNDFYESMAGEPTRGKIIDFHSRYKLTLMAHHPESYRSLGRLVADVASYEIDEFYREYRLGLMTALSNRASRKN
NTNVLMHLQGYFKRSLNKDEKEELATVIQDYRTGTLPLLAPLTLIKHYLNAYPDEYLQRQKFLEPHPQEMRLRYGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 9e-73 48
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 7e-73 48
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 5e-73 48
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 6e-73 48
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 9e-73 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPA1473 NP_800983.1 hypothetical protein VFG0490 Protein 3e-73 48