Gene Information

Name : VPA0871 (VPA0871)
Accession : NP_800382.1
Strain :
Genome accession: NC_004605
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 913554 - 914246 bp
Length : 693 bp
Strand : +
Note : similar to GB:AAF96680.1 (AE004406) percent identity 70 in 225 aa

DNA sequence : 
ATGCAAACACCTGTACTCAAAGCACCTATTGTTCAAGCGAATTTGGTTTCTAAACAAGTCTCTACTAATCAAGAACAATT
AACAATCCTTAAAGATGTAAATGTTGACATCAGAAAGGGCGAGACCATCGCAATTGTCGGCACATCTGGTGCAGGCAAAT
CCACGCTAATGACATTGTTGGCGGGGCTCGACACACCAACCTCCGGAGAAATCACGCTTCTAGGACACGAACTTTCGAAG
CTAGATGACGAAGCTCGTGCGAAAATCCGAGCCGATTCTCTAGGATTTGTCTTTCAAAGCTTTCTACTTATCCCAAGTTT
GAGTGCACTTCGCAATGTGACCTTACCGTGTCTTTTACGCGGAGAAGCCGAAGATGAAGCACGAGCGACAGAATTATTAA
GCGCCGTAGGATTGGAAAAGCGACTCGACCACTTACCAAGTCAACTTTCTGGTGGTGAACAACAACGCGTCGCGTTGGCC
AGAGCATTTATGACTCAGCCAGAATTGCTGTTTGCTGATGAACCGACAGGGAATCTTGATCACCAAACCGCGGATAAAGT
CATCGAGCTGTTGTTCGATCTCAATAGCCAGCACGGTACGACATTAATATTGGTCACTCATGATGTGAACTTAGCAAGCC
GATGCGACAGAATTTATCGTATGGAGGCGGGTGAGCTTAAGGAGGAGATGTAA

Protein sequence : 
MQTPVLKAPIVQANLVSKQVSTNQEQLTILKDVNVDIRKGETIAIVGTSGAGKSTLMTLLAGLDTPTSGEITLLGHELSK
LDDEARAKIRADSLGFVFQSFLLIPSLSALRNVTLPCLLRGEAEDEARATELLSAVGLEKRLDHLPSQLSGGEQQRVALA
RAFMTQPELLFADEPTGNLDHQTADKVIELLFDLNSQHGTTLILVTHDVNLASRCDRIYRMEAGELKEEM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPA0871 NP_800382.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-38 48
VPA0871 NP_800382.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-39 47
VPA0871 NP_800382.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 5e-37 42
VPA0871 NP_800382.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-36 41