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Name : tsaC (t2548) Accession : NP_806272.1 Strain : Salmonella enterica Ty2 Genome accession: NC_004631 Putative virulence/resistance : Unknown Product : outer membrane fimbrial usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 2625217 - 2627904 bp Length : 2688 bp Strand : - Note : corresponds to STY0347 from Accession AL513382: Salmonella typhi CT18 DNA sequence : GTGAGTCGTTATTTCTGGATGTATTATTTACTGGGATTGTGCAGTTTTACCAGCCAGGCAACTCTTATTCCCCCTCCTGG ATTTGAATCTCTGCTGGAAGGACAGACTGAGCAAATTGAAGTGTTGCTACCAGGGCATTCACTGGGATTATTTCCGGTGG TGGTTAAACCGGACACCGTGCAGTTCATGTCCCCATTGATGGTACTTGAAAGCAGTGGGCTTGCCGCGTTGCCGGCCGCA GAACGGCAAAAAGCGCTGGCTGCACTCAGCCGTCCGTTGCTACGTAACAGCAATCTGGTCTGTGGTGTCTCAGAAGCAAA AGACAGCAGCGAGTGTGGTTACGTGGCAACAGATAAAGAGGATGTTGCGGTTATTTTTGATGAGAACAACGCTCAGTTAT CTTTGTTTCTTAACCGGGACTGGTTGCCGGATGAAGAACGACGTGATAAACGCTGGCTGACTCCGACCCCGGAGGGTGTC AGCGCATTTATTCACCGCCAGACGCTGTATCTGAGTGATGATCTCCACAGTCGTAATATGACACTGAATGGTAGCGGTGC CCTGGGGCTTGGTGACGGTCGTTATCTGGGAGGCGACTGGGCGGCTATCTGGAATCAGTCAGAACATTACAATAACAGTC AGGCCTGGTTTGACAATCTGTTTGTCCGTCAGGATCTCGGCAATCAGTATTATCTCCAGGCTGGTCGGATGGATCAGCGG AATCTGTCCAGCGCCACGGGGGGGGATTTTGGGTTCAGTCTGCTTCCCCTGAGCCGGTTTGATGGATTACGAACCGGGAC CACCCAAGCTTATGTTAACCATGAGGTGGACCATAATGCCACTCCGGTTATGGTTCAGGTTACCCGAAATGCCCGTATTG ATATTTATCGTGGCAGCGAGTTGCTGGGGAGTCAGTTCCTGACCCCGGGAATGCATACCCTGGATACTCATTCTCTTCCA CCGGGAAGCTATCCTCTGGCGTTGCGGGTGTATGAGGATGGGATTCTGCGGCGAACGGAGACCCAGCCCTTCAGTAAGGG GGGCAATAGCTTCAGTGCACAGACCCAGTGGTTTATTCAGGGCGGGCTGGAAGATACCGGGGATAAAGCCAGCCATTATG ACGGTGAGACTGTCATGGCTGCCGGATTCCAAACTGGGCTGCGGAAAAATATCAGTCTGACCGAAGGTATCTCTCTGGCA CATGAGGCCTGGTACAGTGAAACCCGACTGAATTCACAGCATGCAGTGCTGGATGGCACGCTGGACCTTTCTGCCGGGAT ACTGCATGGGACAGACAGCACGAGCGGTAACACTGAGCAGGTGACATACAACGACGGATTTTCCGCGAGTCTGTGGCGTA ACCATACGGAAAGTGATGCCTGTAGTGGTCGTCATCCACAGTCAGTGCATGCCAGTATGACCTGCCAGACTTCGATGAAC GCCTCCCTGTCGGTTTCGGTGGGGAACTGGTATGCCCTACTGGGATACAGTACCAGCAGGACAGAAGGTCGGCCGGTTTA CCGGGGATATGATGATAACAGTGACAAAGAAAATGTGTTCTGGCGACAGGCATACATCCCTGCCTCTCACCGCGAATCTG CTCAGGCTAGTGCAACGTACAGCCTTAATATGGCTGGCATGAATATTAATACCCATGGGGGAGTATGGCGAACCCGAAAT GACGGAATGAATGATGATGGCTTGTTTATGAGTGTCAGTGTGTCATATGCCTCTCAACCACCGACAATGACTGGCAGTAA TAGGTATACCTCAGCCGGGACCGATATTCACAGTAGCCGGAATCAAAAAACACAGACGTCCTGGAATGTGAACCATGTGA GATCCTGGCAGCAGGATCTGTATCGTGAACTGTCGGTGGGTTTCTCCGGTTATAACGACGACAGCTGGAGCGGGAGTCTC GGCGGACGCATGAGCGGCCGTATGGGTGAACTGAGCGCCACTATCAGTAACTCCCATCAACGTAATGCGGGCAGCGCCAG TTCACTCACCGCTGGCTACAGCTCGTCTCTGGCGTTATCCCGTAATGGACTGTTCTGGGGAGGTGGTCAGGACGGTGAAC CGGCCTCTGGCATGGCGGTGAACGTGGAGTCAGAGGGGGACGAGGGCAGTAGCGGGAAAGTAGTCAGCGTTCGTGGCAGC AGCCAGCCGTTCAGTCTCGGTTTTGGTCAGCAGTCGCTGTTGCTGATGGAAGGCTATAACGCCACGGAGGTGACCATTGA GGATGCAGGGGTTAGTTCACAGGGTATGGCAGGCGTAAAAGCGGGAGGGGGAAGCAGGTGTTACTTCCTGACACCCGGGC ATCTGCTGGTTCACAACATCAGCGCCAGTATGAGCCGACTGTACGTTGGCCGCGTACTGGACAAGGATGGCAGACCGCTG CTGGACGCACAGCCACTGAACTATCCATTTTTGTCGTTGGGACCTTCCGGGCGATTTAGCCTGCAGAGCGAGCATAAAGA ATCCAGCCTGTGGCTGCTGTCTAAAAACAGGATCCTGCGTTGTCCGATGTCAGTACATAAACGTCGGGATGTTATGCAGG TAGTGGGTGATGTGCGGTGTGAATTAAGTGACGTGGATGCCCTGCCACAGGCGTTGCAAATATCGCCGCGGGTCATCCGT TTGCTGAACGTGGCAGGTTTGCTGCGCCATTCCGTTCAGGAAGCCTGA Protein sequence : MSRYFWMYYLLGLCSFTSQATLIPPPGFESLLEGQTEQIEVLLPGHSLGLFPVVVKPDTVQFMSPLMVLESSGLAALPAA ERQKALAALSRPLLRNSNLVCGVSEAKDSSECGYVATDKEDVAVIFDENNAQLSLFLNRDWLPDEERRDKRWLTPTPEGV SAFIHRQTLYLSDDLHSRNMTLNGSGALGLGDGRYLGGDWAAIWNQSEHYNNSQAWFDNLFVRQDLGNQYYLQAGRMDQR NLSSATGGDFGFSLLPLSRFDGLRTGTTQAYVNHEVDHNATPVMVQVTRNARIDIYRGSELLGSQFLTPGMHTLDTHSLP PGSYPLALRVYEDGILRRTETQPFSKGGNSFSAQTQWFIQGGLEDTGDKASHYDGETVMAAGFQTGLRKNISLTEGISLA HEAWYSETRLNSQHAVLDGTLDLSAGILHGTDSTSGNTEQVTYNDGFSASLWRNHTESDACSGRHPQSVHASMTCQTSMN ASLSVSVGNWYALLGYSTSRTEGRPVYRGYDDNSDKENVFWRQAYIPASHRESAQASATYSLNMAGMNINTHGGVWRTRN DGMNDDGLFMSVSVSYASQPPTMTGSNRYTSAGTDIHSSRNQKTQTSWNVNHVRSWQQDLYRELSVGFSGYNDDSWSGSL GGRMSGRMGELSATISNSHQRNAGSASSLTAGYSSSLALSRNGLFWGGGQDGEPASGMAVNVESEGDEGSSGKVVSVRGS SQPFSLGFGQQSLLLMEGYNATEVTIEDAGVSSQGMAGVKAGGGSRCYFLTPGHLLVHNISASMSRLYVGRVLDKDGRPL LDAQPLNYPFLSLGPSGRFSLQSEHKESSLWLLSKNRILRCPMSVHKRRDVMQVVGDVRCELSDVDALPQALQISPRVIR LLNVAGLLRHSVQEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tsaC | NP_454914.1 | outer membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 0.0 | 99 |
