|
Name : HopX1 (PSPTOA0012) Accession : NP_808672.1 Strain : Genome accession: NC_004633 Putative virulence/resistance : Unknown Product : type III effector HopX1 Function : - COG functional category : - COG ID : - EC number : - Position : 14914 - 16068 bp Length : 1155 bp Strand : - Note : Also known as AvrPphE; similar to GP:571514; identified by sequence similarity; putative DNA sequence : ATGAAAATACATAACGCTGGCCTAACCCCACCTTTGCCGGGCATTTCGAATGGAAACGTTGGAAAGGCGGCGCAATCATC AATAACTCAACCGCAGAGCCAGCAAGGCTCTTATGGCTTGCCACCAGAAAGCTCTGAGACTCGCCCTGATAGGGCGCGTG CGAACTATCCATATTCATCAGTACAAACACGGTTGCCGCCCGTTGCGTCTGCTGGGAAACCGCTGCCTGATACACCATCT TCTTTGCCCGGCTACTTACTGTTGCGAAGGCTGGACCATCGCCCTGTGGATCAGGAAGGTACCAAAAGTCTGATCCCGGC AGACAAGGCTGTGGCTGAAGCGCGCCGTGCATTGCCCTTTGGAAGAGGCAATATTGATGTGGATGCGCAACTTTCCAATC TGGAAAGTGGAGCCCGCACCCTTGCAGCAAGGTGCTTGAGAAAAGATGCCGAGGCCGCCGGTCATGAGCCTATGCCTGCG AATGAGCCGATGAACTGGCATGTTCTTGTTGCGATGTCAGGCCAGGTGTTCGGCGCGGGCAACTGTGGCGAACATGCTCG TATAGCGAGCTTCGCCTATGGAGCTTTGGCCCAGGAAAACGGACGATCTGAATATGAAAACATCTACTTGGCTGCATCGA CTGAGGAAGATCATGTGTGGGCTGAAACCGACGAATCCCAGTCTGGCACCTCAACGATTGTCATGGATCCGTGGTCAAAT GGTTCAGCCATATTTGCGGAGGACAGTAGGTTTGCGAAAAATCGAAATGCTGTAGAGCGTACGGATACGTTTAATCTTTC AACCGCAGCCGAAGCGGGCAAAATTACGCGTGAGACAGCCGAGAAGGCTTTGACGCAGGTCACAACCCGATTGCAGAAAC GCCTGGCGGATCAGCAGGAGCAAGTCTCGCCCATCAAAAGTGGTCGCTATCGACCAGAAAAATCGGTACTTGATGATGCA TTTGTCCGCAGAGTGAGCGACAAGTTGACCTCCCCTGATTTGCGGCGTGCACTACAGGTAGATATTGAAGCGGTCGGAGT CGCAATGTCGCTCGGCACCAAGGGCGTCAAGGACGCTACTCGACAAGCCCGACCTTTGGTTGAGCTTGCAGTGAAGGTCG CCTCTCCTCAAGGCTTGGCGAGACGAGATGTCTGA Protein sequence : MKIHNAGLTPPLPGISNGNVGKAAQSSITQPQSQQGSYGLPPESSETRPDRARANYPYSSVQTRLPPVASAGKPLPDTPS SLPGYLLLRRLDHRPVDQEGTKSLIPADKAVAEARRALPFGRGNIDVDAQLSNLESGARTLAARCLRKDAEAAGHEPMPA NEPMNWHVLVAMSGQVFGAGNCGEHARIASFAYGALAQENGRSEYENIYLAASTEEDHVWAETDESQSGTSTIVMDPWSN GSAIFAEDSRFAKNRNAVERTDTFNLSTAAEAGKITRETAEKALTQVTTRLQKRLADQQEQVSPIKSGRYRPEKSVLDDA FVRRVSDKLTSPDLRRALQVDIEAVGVAMSLGTKGVKDATRQARPLVELAVKVASPQGLARRDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF71495.1 | unknown | Not tested | Hrp PAI | Protein | 1e-119 | 73 |
| unnamed | AAN85190.1 | unknown | Not tested | Hrp PAI | Protein | 2e-120 | 72 |
| unnamed | AAN85175.1 | AvrPphE8 | Not tested | Hrp PAI | Protein | 1e-109 | 67 |
