Gene Information

Name : NE0980 (NE0980)
Accession : NP_841053.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : RNA polymerase ECF-subfamily sigma-70 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1065883 - 1066386 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence :

ATGTCGACTACGGAAGAGGCTTCTGAGAACGAGATTACCATTCTCTACACAGACCATCATGGCTGGCTCAAAAGATGGTT
ATACCGCAAGCTGGGCAATTCATTCGATGCGGCCGATCTGGCGCATGATATCTTCATGCGATTGCTTGCACGAGAACAAT
CGACAGTCATTCATCAACCGCGCGCTTTACTGACGACGATTGCCCAAGGAATCGTTTCGAACTTTTACCGGCGGCGTAAA
ATCGAAACTGCCTACCTGGAAACGCTTGCTCATCTGCCAGAGGCACAGGCACCCGATCCTGAAATCCGGGTAATCCTGCT
GGAAACACTGATTGAAATCGACCGGCGTCTCGACATGCTGGCGCCACTCGTTCGCCGGGCCTTTCTATTGTCACAGGTCG
ATGGGATGAAACAAACCGATATCGCCGCTGAACTGAATCTCTCACTGGCCACAGTGCAGCGCTATATCGTCAAGGCAGTA
CACCAGTGTTATTTCGGTGAATGA

Protein sequence :

MSTTEEASENEITILYTDHHGWLKRWLYRKLGNSFDAADLAHDIFMRLLAREQSTVIHQPRALLTTIAQGIVSNFYRRRK
IETAYLETLAHLPEAQAPDPEIRVILLETLIEIDRRLDMLAPLVRRAFLLSQVDGMKQTDIAAELNLSLATVQRYIVKAV
HQCYFGE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	2e-33	49

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
NE0980	NP_841053.1	RNA polymerase ECF-subfamily sigma-70 factor	VFG1049	Protein	7e-34	49