Gene Information

Name : NE1071 (NE1071)
Accession : NP_841135.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1158053 - 1158589 bp
Length : 537 bp
Strand : -
Note : -

DNA sequence : 
ATGTGCATGACCGATGACGAAGAGGGCGCTGTGCCGGCCACTGACCTTGCAGCACACCGAATCCATGTTCTGTATACCGA
CCATCACGGCTGGTTGTATGGCTGGCTGCGCTGCAAACTCGGCAATGCCTGTGATGCAGCCGATCTGGCGCACGATACTT
TTCTGCGTGTCATGGCTTCACAAAGGATGCCGGTACATTTGGGTGAGGAACCGCGTGCGTTGCTGACGCACATTGCCAAG
GGTCTGGTCATCGACCACTGGCGGCGACAGGATGTAGAGCGTGCTTACCTGGAAGCACTTGCCCACCTGCCAGAGACAGA
AATCCCTTCGCCTGAAACACGACTGCTGATCCTGGAAGCGCTGTGCCGCATCGAAACCATGTTGCGCGGTTTGCCGGTAC
GTACACGGGATATTTTCCTGCTGGCCCAGCTCGACGGGCTGACTTACCGGCAGATCGCTGATCAAACCGGTTTTTCACTC
ATTACGATCAAGCGACACATGCGCACAGCCTTTGTCGCTTGCCTGATGCTGGATTGA

Protein sequence : 
MCMTDDEEGAVPATDLAAHRIHVLYTDHHGWLYGWLRCKLGNACDAADLAHDTFLRVMASQRMPVHLGEEPRALLTHIAK
GLVIDHWRRQDVERAYLEALAHLPETEIPSPETRLLILEALCRIETMLRGLPVRTRDIFLLAQLDGLTYRQIADQTGFSL
ITIKRHMRTAFVACLMLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NE1071 NP_841135.1 ECF subfamily RNA polymerase sigma-70 factor VFG1049 Protein 7e-31 47