Gene Information

Name : NE1079 (NE1079)
Accession : NP_841142.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1164645 - 1165163 bp
Length : 519 bp
Strand : -
Note : -

DNA sequence :

ATGACCATCCCGGTTGTCAAGCTGGTAACGTGGCAGCAAGCGCATGATCTGTACAATAATCATCATGGCTGGTTGCAGAA
ATGGCTGTATCGCAGGCTGGGTAATACTTTCGATGCAGCAGATATTGCCCAGGATGTATTCATGCGGGTACTTACTCGCC
GGCAACCCTCCCAGATACACGAACCACGGGCATATCTGTCTTCCATCGCCCGTGGCCTGGTCGTCGATCACTGGCGTCGG
CGCGAGCTGGAGCAGGTCTGGCTGGAGATACTGGCAGTTCTGCCTGAGCCCGAAACGCCTGCCCCTGAAAGCCGCCTGAT
CTTTCTGGAAACGCTGGTCGAGATAGACCGGGTGCTCGATTCACTCAAACCGGCAGTACGCACCGCCTTTCTACTGGCAC
AGATCGATGGGCTGACCTGTTCGCAGATCGCAAAACATCTGGACGTATCCGTGGCGACTGTCGAGCGCTATATTGCCAAG
GCACTGCGCCAGTGTTACGCATTGCATTTCGAAGCATGA

Protein sequence :

MTIPVVKLVTWQQAHDLYNNHHGWLQKWLYRRLGNTFDAADIAQDVFMRVLTRRQPSQIHEPRAYLSSIARGLVVDHWRR
RELEQVWLEILAVLPEPETPAPESRLIFLETLVEIDRVLDSLKPAVRTAFLLAQIDGLTCSQIAKHLDVSVATVERYIAK
ALRQCYALHFEA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	2e-36	48

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
NE1079	NP_841142.1	ECF subfamily RNA polymerase sigma factor	VFG1049	Protein	1e-36	48