Gene Information

Name : NE1086 (NE1086)
Accession : NP_841149.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1173454 - 1173966 bp
Length : 513 bp
Strand : -
Note : -

DNA sequence : 
GTGACGATCCAGAATCCGGAAAATTCCCTTGCTTCCTGCAGTATCGAGTCGCTCTATTGCCATCATCACAAATGGCTGGT
GGGGTGGTTGCGTCGCAGGCTGAGCAATGCTCTGCAGGCTCCGGATCTGGCGCATGATATTTTTTTGCGGATTCTGAGCA
AGGATTCACTCCCTGTCATTCATGAGCCACGTGCGCTGCTCACTACGATCGCACAGGGTATCGTAGCCAATTTCCATCGT
CATCAGCGCATCGAACAGGCATATCTCGATGCACTGGCACAGATACCGGAGTCATTGGCGCCGTCACCCGAGGCTCAGGC
CATCATGCTGGAAACACTGGTGGAAATCGATGCGCTGCTGGATGGTATGCCGCCTCTGGTACGCAAGGTTTTTCTGTTGT
CACAGATCGATGGCCTGCGTCAGAGCGAGATCGCTCAGCGTTGCGGTATTTCTGTTCCCACTGTCAAGCGTTATGTAGCA
AAAGCGCTGGAACAATGCTGCTTTATCGGATGA

Protein sequence : 
MTIQNPENSLASCSIESLYCHHHKWLVGWLRRRLSNALQAPDLAHDIFLRILSKDSLPVIHEPRALLTTIAQGIVANFHR
HQRIEQAYLDALAQIPESLAPSPEAQAIMLETLVEIDALLDGMPPLVRKVFLLSQIDGLRQSEIAQRCGISVPTVKRYVA
KALEQCCFIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 5e-35 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NE1086 NP_841149.1 ECF subfamily RNA polymerase sigma-70 factor VFG1049 Protein 2e-35 47