Gene Information

Name : NE1096 (NE1096)
Accession : NP_841157.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1188693 - 1189208 bp
Length : 516 bp
Strand : -
Note : -

DNA sequence : 
ATGCCTCCGCCCGATATCCACTGCAAACAGGTAGAAACCCTTTACAGCGACCATCACCGATGGCTGCGCGGGTGGTTATG
CAAAAAGCTGGGCTGCAGTGAACAGGCGGCTGATCTCGTGCATGATACTTTTCTGCGTATCCTGAATTCCGGAGAGGTGC
TGACAGGGCTGACTAAACCGCGTGCCTACCTGACGACTACCGCAAAACGATTGCTGATCGATCGTGCCCGTCATCGACGG
GTCGAGCAGTCCTATCTGGATGAACTTGCGCTGATGACGGCCACGATGGAAGGTGCACCCTCACCGGAAGCCATTCTGAT
GGCACTGGAAGCACTGAAACAACTCAGTGATGCTCTGCAAAGCTTGCCGGCAAATGCCAGTGAAGCTTTTCTGCAACATT
ATCTCCTCGATGAAACCCAGCCGGCCATTGCTGCCAGGCTCGGTGTTTCAGTGCGCATGGTGCAGAAATATCTGGCACAG
GCACTGCTGTGCTGCCACCGGGCGCTCACCGATTAA

Protein sequence : 
MPPPDIHCKQVETLYSDHHRWLRGWLCKKLGCSEQAADLVHDTFLRILNSGEVLTGLTKPRAYLTTTAKRLLIDRARHRR
VEQSYLDELALMTATMEGAPSPEAILMALEALKQLSDALQSLPANASEAFLQHYLLDETQPAIAARLGVSVRMVQKYLAQ
ALLCCHRALTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NE1096 NP_841157.1 ECF subfamily RNA polymerase sigma factor VFG1049 Protein 7e-26 43