Gene Information

Name : NE1099 (NE1099)
Accession : NP_841160.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1193020 - 1193523 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence : 
ATGTCGATCGACGATCCCGCACACCTGAACGCTGTGGATACGCTTTACAGTGATCACCATGACTGGCTGGTAAGGTGGTT
GCGCTCCCGTTTGGGATGCGCTCATAACGCCGCTGATCTGGCCCAGGATACCTTCACCCGTATACTGGCTTCACGGGATG
CCACGACTGTATGCGAACCACGTGCTTATCTGACTACGATCGCCAAAAGTCTGATGGTCAACTGGTATCGTCGCCAGGCA
CTTGAGCGTGCCTATCTGGATGCCCTGGCACATATACCTGAAACGGAAGTACCGGCACCCGAACAGCATCTGATCATTCT
CGAAACGTTGCATGAAATAGACCGGATGCTCGATTCGCTTGCTCCCAAAGTCAGACAGGCATTCCTGCTCTCACAGATCG
AAGGTTTGAAATACGAAGTGATTGCAGAGCAGCTCGGGGTTTCACTCGGCTCAGTCAAACGTTATATGCAGCAGGCTTTC
CGCCAGTGCCTGCTTCTGATGTAA

Protein sequence : 
MSIDDPAHLNAVDTLYSDHHDWLVRWLRSRLGCAHNAADLAQDTFTRILASRDATTVCEPRAYLTTIAKSLMVNWYRRQA
LERAYLDALAHIPETEVPAPEQHLIILETLHEIDRMLDSLAPKVRQAFLLSQIEGLKYEVIAEQLGVSLGSVKRYMQQAF
RQCLLLM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 5e-38 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NE1099 NP_841160.1 ECF subfamily RNA polymerase sigma factor VFG1049 Protein 2e-38 50