Gene Information

Name : NE1101 (NE1101)
Accession : NP_841162.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1194076 - 1194585 bp
Length : 510 bp
Strand : +
Note : -

DNA sequence : 
GTGTCAGCCGATGAATTCATACTGCAGCAGAAAGTTCATGCCTTGTACAGCAACCACCGTAGCTGGTTACAGAGGTGGTT
GTACCGCAAGCTGGGCAATGCCTGCGATGCTGCCGATCTGGTGCAAGACACATTCATCAGCGTGATCACTGGAGGCTACG
CGGATGACATTCGCGAGCCGAAACCTTTCCTCGCCACGATCGCCGGCCGGCTGGTTGCCCACCGGTGGCGCCGCAATCAG
CTCGAAACGGCCTACCTCGAAGCCCTGGCAGCACTGCCTGTAGAGTTGATGCCTTCGCCCGAAGCACATGTGCTGGCGCT
GGAAGCCTTACTGGAAATCGATCGTGCGCTCGATGGCCTGCCGACCCGTGTCAAGGAAGCCTTTCTGCTCGCCCATCTGG
AAGAACTCTCGTATGCACAGATCGCGGAACGGCTCAACGTATCGACCAGTTCGGTCAAGCAATACCTCACACGTGCCAAC
CGGCAGTGCCTGTTTGCTCTGTCAGTCTGA

Protein sequence : 
MSADEFILQQKVHALYSNHRSWLQRWLYRKLGNACDAADLVQDTFISVITGGYADDIREPKPFLATIAGRLVAHRWRRNQ
LETAYLEALAALPVELMPSPEAHVLALEALLEIDRALDGLPTRVKEAFLLAHLEELSYAQIAERLNVSTSSVKQYLTRAN
RQCLFALSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-26 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NE1101 NP_841162.1 ECF subfamily RNA polymerase sigma factor VFG1049 Protein 5e-27 48