Gene Information

Name : NE0128 (NE0128)
Accession : NP_840226.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 156976 - 157509 bp
Length : 534 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATACTTGCTGGAGCCTGCTTTGAGCGTTAATCCCATCCATTCTGACTCGATTACCGAGCTGTATCAGGACCATCA
CGGCTGGCTCCATGGTTGGTTACGCAAAAAACTCGGGTGTTCTCATCAGGCGGCTGATCTCGCGCACGATACCTTTATGC
GCCTGCTCACACGGGAAGAGCCAATTCTCATTCAGGAACCACGCGCTTTTCTGACTACGGTCGCACAACGGGTTCTGGCG
AATCACTGGCGACGTAAGCAGATCGAGCAAGCCTATTTTGAGATGCTTGTACAGCATCCCGAGGCTTCAGTTCTTTCAGC
CGAAGAATGCGCCATTCTGCTGGAAACACTCCTGGAAATCGATCATCTGCTGAATCGTTTACCACTACCGGTCAAACGTG
CTTTTTTATATGCTCAGTTGGATGGCATGAGTCATGCCGAGATTGCGGCTGAATTGAATATTTCGATTACGACCGTTAAA
CGCTATCTGATCAAAGCCGGTGCACAATGCTACTTTGCACTGGTAATCGATTGA

Protein sequence : 
MKYLLEPALSVNPIHSDSITELYQDHHGWLHGWLRKKLGCSHQAADLAHDTFMRLLTREEPILIQEPRAFLTTVAQRVLA
NHWRRKQIEQAYFEMLVQHPEASVLSAEECAILLETLLEIDHLLNRLPLPVKRAFLYAQLDGMSHAEIAAELNISITTVK
RYLIKAGAQCYFALVID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-27 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NE0128 NP_840226.1 ECF subfamily RNA polymerase sigma-70 factor VFG1049 Protein 1e-27 44