Gene Information

Name : NE1617 (NE1617)
Accession : NP_841656.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1745225 - 1745785 bp
Length : 561 bp
Strand : +
Note : -

DNA sequence :
ATGCACTCGCGTGATCACCAGGAGGATGTCGCACCAGCCGCCAACCCTGCAATGCAGCAGGTTCACTTTCTCTACAGCGA
TCATCATAACTGGCTGTACGGCTGGTTGCGCTTTCGCCTGGGCGATGCGGCCGACCTGGCGCACGATACCTTCGTGCGCC
TGATTGCCCGCCCCCGGTGCTTCGACAGCAGCCAGGAAGCCCGCGCCTACCTGCGAACCATCGCCAACGGCCTGTGCATC
GACCTGTGGCGCCACCGCGAGATCGAACGTGCCTGGCTGGAGACCCTGGCTACACAACCCGAGGCGTACGCGCCCTCGGC
CGAGGAACAGACAGCGGTACTGCAGGCGCTGCACGAAATCGATGGCATGCTGCGCCATCTGCCGCTCAAAGCCGCTCGGG
CTTTCGTCCTGGCGATGGCCTGCGGCATGACGCACCAGGAAGTCGCGCGTGAGCTGGGCGTGTCCTCGCGCATGGTCGGA
CACTACATCACCCGAGCCATGCTCCATTGTATGCAGCTCGAAGCACGCAATCTGGGCCAGGCCGGCGCCATTGCTCCATG
A

Protein sequence :
MHSRDHQEDVAPAANPAMQQVHFLYSDHHNWLYGWLRFRLGDAADLAHDTFVRLIARPRCFDSSQEARAYLRTIANGLCI
DLWRHREIERAWLETLATQPEAYAPSAEEQTAVLQALHEIDGMLRHLPLKAARAFVLAMACGMTHQEVARELGVSSRMVG
HYITRAMLHCMQLEARNLGQAGAIAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 5e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NE1617 NP_841656.1 ECF subfamily RNA polymerase sigma factor VFG1049 Protein 2e-22 41