Gene Information

Name : fecI (NE2435)
Accession : NP_842427.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : fecI specialized sigma subunits of RNA polymerase
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2657490 - 2658047 bp
Length : 558 bp
Strand : -
Note : -

DNA sequence :

ATGTTGGATAACAGCATTCCTACCGATTCATGTCTGGTGTCTGGTGCTACCGTGTCCACGGACATTGAGACCCTGTACTG
CAATCACCACGACTGGCTGCAGGTTTGGCTGCGCCGCAGACTGAGCAGTGCTGTTGATGCATCCGATCTGGCGCATGACA
CCTTCGTGCGCGTTCTGGTTTCGGGCCGCATGCCCAATGCCGAGCAATCGCGCGCTTTCCTTACTCAGATCGCCAAGGGT
CTGGCGGTGGATCTGTACCGTCGTCGTGCCATCGAAGAGGCTTATCTGGCAGCGCTGGCGCAACTGCCGGAAAATCTTGC
GCCCTCGGCTGAGGAGCGTGTGCTGGCGCTGCAAGTGCTGTTGTTGCTCGATACTGCGCTGGGCAGCCTTCCATCTCGGG
TGCGTGAAGTGTTCCTGCTGTCGCGGCTCGACGGATTGACCTATTCTGACATTGCGCAGCGCCGGGGTATTTCTGTCGCG
ACAGTGCGCAAGTATATGCTGCGCGCCGCGCAGGCTTGCCATTGTGTCTTGAATTCACCGACTGGCACCGCTCCATGA

Protein sequence :

MLDNSIPTDSCLVSGATVSTDIETLYCNHHDWLQVWLRRRLSSAVDASDLAHDTFVRVLVSGRMPNAEQSRAFLTQIAKG
LAVDLYRRRAIEEAYLAALAQLPENLAPSAEERVLALQVLLLLDTALGSLPSRVREVFLLSRLDGLTYSDIAQRRGISVA
TVRKYMLRAAQACHCVLNSPTGTAP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-34	51

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI	NP_842427.1	fecI specialized sigma subunits of RNA polymerase	VFG1049	Protein	5e-35	51