Gene Information

Name : NE2486 (NE2486)
Accession : NP_842475.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2713813 - 2714454 bp
Length : 642 bp
Strand : -
Note : -

DNA sequence :
ATGCCATTTCTGTTATCTGGTCATCTATCAGACCAGTCTTGCAAGGCGGGTACCTTACCCTATAAAATAAGAATCGTTCT
CATTTTATTTTTGTGTCCGCATATGTGCCTGACCAATGACGAGGGGAGCGCTGTGCCGGCCACTGACCTTGCAGCACACC
AAATCCATATTCTGTATACCGACCATCACGGCTGGCTGTATAACTGGTTGCGCCACAAACTGGGCAATGCCTGCGATGCT
GCGGATATTGCGCAAGATACGTTCATGCGCATACTTACCCGGCAACAGCCTGTGCATCTGAATGAGCCGCGCGCTTATCT
TTCTACCATTGCGCATGGTCTGGTTATCGATCACTGGCGTCGGCGTGAGCTGGAACGGGCCTGGCTGGAAACGCTGGCGT
CATTGCCGGAGCCTGAAGCGCCTGCACCCGAGACGCGGCTGATCTTTCTGGAGGCATTGATCGAGATCGACAGGTTGCTC
GATTCGCTCAAACCCCGGGTACGTACCACCTTCCTGCTGGCCCAGCTCGATGGGCTGACCTGCCCGCAAATTGCCGAGCG
CCTGGGGGTATCGCTATCTACAGTGGAACGCTACATCACCAAAGCGCTGCGCAGTTGCTACATGCTGCGTTTCGAACCAT
GA

Protein sequence :
MPFLLSGHLSDQSCKAGTLPYKIRIVLILFLCPHMCLTNDEGSAVPATDLAAHQIHILYTDHHGWLYNWLRHKLGNACDA
ADIAQDTFMRILTRQQPVHLNEPRAYLSTIAHGLVIDHWRRRELERAWLETLASLPEPEAPAPETRLIFLEALIEIDRLL
DSLKPRVRTTFLLAQLDGLTCPQIAERLGVSLSTVERYITKALRSCYMLRFEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 8e-24 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NE2486 NP_842475.1 ECF subfamily RNA polymerase sigma factor VFG1049 Protein 4e-24 48