Gene Information

Name : 16S_rRNA (RNA_45)
Accession : -
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 69146 - 70677 bp
Length : 1532 bp
Strand : +
Note : -

DNA sequence :
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATGCAAGTCGAACGGCAGCGGGGGCTTCGGCCT
GCCGGCGAGTGGCGAACGGGTGAGTAATACATCGGAACGTGTCCTTAAGTGGGGAATAACGCATCGAAAGATGTGCTAAT
ACCGCATATCTCTGAGGAGAAAAGCAGGGGATCGCAAGACCTTGCGCTAAAGGAGCGGCCGATGTCTGATTAGCTAGTTG
GTGGGGTAAAGGCTTACCAAGGCAACGATCAGTAGTTGGTCTGAGAGGACGGCCAACCACACTGGGACTGAGACACGGCC
CAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGAGTGAAGA
AGGCCTTCGGGTTGTAAAGCTCTTTTAGTCGGAAAGAAAGAGTTGCAATGAATAATTGTGATTTATGACGGTACCGACAG
AAAAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAA
GGGTGCGCAGGCGGTCTTGCAAGTCAGATGTGAAAGCCCCGGGCTTAACCTGGGAATTGCGTTTGAAACTACAAGGCTAG
AGTGCAGCAGAGGGGAGTGGAATTCCATGTGTAGCAGTGAAATGCGTAGAGATGTGGAAGAACACCGATGGCGAAGGCAG
CTCCCTGGGTTGACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTA
AACGATGTCAACTAGTTGTCGGATCTAATTAAGGATTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAGTAC
GGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATTATGTGGATTAATTCGATGCAACGCG
AAAAACCTTACCTACCCTTGACATGCTTGGAATCTAATGGAGACATAAGAGTACCCGAAAGGGAGCCAAGACACAGGTGC
TGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCACTAATTGCTAT
CATTTTTAATGAGCACTTTAGTGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCT
TATGGGTAGGGCTTCACACGTAATACAATGGCGTGTACAGAGGGTTGCCAACCCGCGAGGGGGAGCCAATCTCAGAAAGC
ACGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGG
TGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTGGTTTTCACCAGAAGCAGGTAGCTTAACCGT
AAGGAGGGCGCTTGCCACGGTGGGGGTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGA
TCACCTCCTTTC

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-115 87.1
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-115 87.1
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-187 85.6
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-187 85.6
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-187 85.6
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-187 85.6