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Name : ccmF (NE0768) Accession : NP_840842.1 Strain : Nitrosomonas europaea ATCC 19718 Genome accession: NC_004757 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein (CcmF) Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 832633 - 834684 bp Length : 2052 bp Strand : + Note : - DNA sequence : ATGATTCCGGAACTTGGTAACTTTGCCCTCATCCTCGCAATGCTGCTGGCCCTGGTCCAGGGAACACTACCCATCATTGG CGCGGCACGTGGTATACCCTCGTGGATTGCTTTGGCGCGTCCGGTCACACAGGGACATTTTGTATTTATCGCGATTGCTT TCGGGTGCCTTGCCTATTCGTTCGTAAATAATGATTTCTCTGTATTGAACGTGGCATCCAACTCGAATTCTGATCTTCCT GTGCATTTTCGTTTTGCTGCAACATGGGGATCTCATGAGGGTTCATTATTGCTATGGGTGACCATGCTTGCCGGCTGGTC TGTGGCTGTAAGTGTTTTCAGTCGTCAGTTGCCGGACGATATGGTAGCTCGTGTCTTGGGTGTGCTGGGGCTGGTCAGTG CTGGTTTTCTGCTGTTTCTTTTGTTTACCTCCAACCCTTTCGACAGGTTGTTGCCGGCAGCAATCGAAGGGAATGACCTC AATCCACTACTGCAGGATCCGGGAATGGTTATGCATCCACCCATGTTGTATATGGGGTATGTAGGTTTTTCAGTGGCATT TGCATTTGCAATTGCAGCACTGCTTAACGGCCAGCTGGATGCAGCCTGGGCGAGATGGTCACGTCCATGGACCGTTGTTG CCTGGATTTTCCTGACTATTGGCATCATGGGCGGCAGCTGGTGGGCATATTATGAGCTGGGGTGGGGTGGCTGGTGGTTC TGGGATCCGGTTGAAAATGCATCATTCATGCCTTGGCTGGTAGGTACCGCACTGATACATTCACTGGCCGTGACTGAAAA ACGCGGAAGTTTCAAGAGCTGGACGGTGTTACTGGCAATTACTGCTTTTTCACTGAGTCTGTTGGGGACTTTCCTGGTTC GTTCTGGGGTTCTGACTTCCGTACATGCTTTTGCAACAGATCCGGCACGCGGGATATTTATTCTGGTCTATCTCTCGCTG GTCGTAGGGTGTTCACTGACACTGTTTGCATGGCGAGCATCGAAAGTAGGTCTTGGTGGTAATTTTGAAATTGTCTCACG TGAAACTACTTTGCTTGCCAATAATGTATTGCTGCTGGTGGCTGCAGGTAGCGTATTGCTGGGTACACTTTACCCTCTCC TGATCGATGCATTGGATCTGGGGAAAATTTCTGTAGGCCCTCCTTATTTTGAGGCTGTTTTTGTGCCTCTGATGGCACCG GCAATCTTTCTGATCGGGTTGGGGCCGATTGCTCGCTGGAAGAAAGCCAGCCTGCCAGCCCTGGCGGTGCTGATGAGATG GGCATTCGTTGTGAGTCTGGTGGCTGCAGGGATCATGCCGTTCATCATGGGCGAGTGGAAACCTATGGTCAGTTTTGGAT TGCTTCTGGCTTTCTGGGTCATCGCCAGTATATTTGTCAGCATCAGCCATCGACTCCGGAACGGTGGTGAAGGTGGATTG TTTACCAGACTGGCAAAACAGCCAAGGGGTTATTACGGTATGCACTGTGCACATTTGGGTATTGCAGTGTTCATCATCGG TGTGACGCTGGTCAATGGTTATGAAACCGAGAAAGATGTGCGAATGGAAGTCGGCAGTACCGTGACACTCAAGGAATATA CCTTCCAGTTCAATGGAACCAAGTCGGTTACCGGCCCTAATTACAATGCATCTCAGGGACAGGTCGAGGTATTCAGGGAA GGTAAAAAAGTCAGTGAGTTGCAGCCTGAAAAAAGAACCTATACCGCATCAGGTATGCCTATGACTGAGGCGGCGGTTGA CATGGGGCTGTTGCGTGATTTGTATGTTGCACTGGGTGAGCCGTTGGAAAACGGTGCCTGGATAGTTCGTGTCTATCACA AACCTTTTGTTAACTGGATATGGCTGGGTTGTATGTTGATGGCTTTAGGAGGAGCGCTGGCTGCCAGTGATCGACGTTAT CGTCTCGCAATTGGCAAGAAATCGAGGAATAAGGCAGCTTCAGGACCAGTAGCACCGGAAACTGCAGATATACCGGCCGG GAGCATGGTTACCAATTCAGTTATCCTCTCGGAGGAAGGTGGTAAGGTATGA Protein sequence : MIPELGNFALILAMLLALVQGTLPIIGAARGIPSWIALARPVTQGHFVFIAIAFGCLAYSFVNNDFSVLNVASNSNSDLP VHFRFAATWGSHEGSLLLWVTMLAGWSVAVSVFSRQLPDDMVARVLGVLGLVSAGFLLFLLFTSNPFDRLLPAAIEGNDL NPLLQDPGMVMHPPMLYMGYVGFSVAFAFAIAALLNGQLDAAWARWSRPWTVVAWIFLTIGIMGGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALIHSLAVTEKRGSFKSWTVLLAITAFSLSLLGTFLVRSGVLTSVHAFATDPARGIFILVYLSL VVGCSLTLFAWRASKVGLGGNFEIVSRETTLLANNVLLLVAAGSVLLGTLYPLLIDALDLGKISVGPPYFEAVFVPLMAP AIFLIGLGPIARWKKASLPALAVLMRWAFVVSLVAAGIMPFIMGEWKPMVSFGLLLAFWVIASIFVSISHRLRNGGEGGL FTRLAKQPRGYYGMHCAHLGIAVFIIGVTLVNGYETEKDVRMEVGSTVTLKEYTFQFNGTKSVTGPNYNASQGQVEVFRE GKKVSELQPEKRTYTASGMPMTEAAVDMGLLRDLYVALGEPLENGAWIVRVYHKPFVNWIWLGCMLMALGGALAASDRRY RLAIGKKSRNKAASGPVAPETADIPAGSMVTNSVILSEEGGKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-179 | 62 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-138 | 56 |
