Gene Information

Name : HH1857 (HH1857)
Accession : NP_861388.1
Strain : Helicobacter hepaticus ATCC 51449
Genome accession: NC_004917
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1778864 - 1779553 bp
Length : 690 bp
Strand : -
Note : ATP-binding component

DNA sequence : 
ATGGAAGATTTTATTAAATTGCACAATGTGCGCAAAACTTATGGCAAGGGAGAGAGTGCATTTGAAGCACTCAAAGGTGT
AGATTTACTCATTGATAAAGGCGAATTTGTTGCATTAATGGGACCTAGTGGTTCGGGTAAATCAAGTCTAGCAAATATAC
TTGGCACTCTTGATGTCGGGAGTAGTGGAGAATATTGGTTTTATGATGTGAATGTATTTGAACTTACACAAAATCAACGT
GCACTTTTACGCAGAAACTATATAGGCTTTATTTTTCAAGGTTTTAATCTTTTAGCACGCACAACTGCGTTAGAAAATGT
AGAATTGCCCCTTATGTATCGTGGAGTAAAAAAGACAGAAAGAGAAGAGATTGCTCTTAAAGCACTTGATAAAGTAGGAT
TAAAAGATTGGGCTTCGCACACAAGTGCAAAATTAAGCGGAGGACAACAACAACGCGTAGCAATTGCACGAGCAATTGCT
TCAGAACCACTTTTTTTACTTGCTGATGAACCAACAGGAAATCTTGATACAAAACGAAGTGTGGAAATTATGGAAATTCT
CCAAGAACTCAATCAAAATTTGGGTATTACGATTCTTATGGTAACGCACGAACCTGATATGGCAAAATATGCAAGTAGGG
AATTGCACTTTTTAGATGGGCGCTTAATAAGTGATTCAAAGGATTGCTAA

Protein sequence : 
MEDFIKLHNVRKTYGKGESAFEALKGVDLLIDKGEFVALMGPSGSGKSSLANILGTLDVGSSGEYWFYDVNVFELTQNQR
ALLRRNYIGFIFQGFNLLARTTALENVELPLMYRGVKKTEREEIALKALDKVGLKDWASHTSAKLSGGQQQRVAIARAIA
SEPLFLLADEPTGNLDTKRSVEIMEILQELNQNLGITILMVTHEPDMAKYASRELHFLDGRLISDSKDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HH1857 NP_861388.1 ABC transporter NC_012469.1.7686878. Protein 2e-43 50
HH1857 NP_861388.1 ABC transporter NC_008702.1.4606598. Protein 4e-36 48
HH1857 NP_861388.1 ABC transporter CP001581.1.gene798.p Protein 1e-30 41
HH1857 NP_861388.1 ABC transporter CP001581.1.gene598.p Protein 1e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HH1857 NP_861388.1 ABC transporter VFG0869 Protein 7e-14 41