|
Name : nifS (HH0564) Accession : NP_860095.1 Strain : Helicobacter hepaticus ATCC 51449 Genome accession: NC_004917 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : - Position : 541609 - 542775 bp Length : 1167 bp Strand : - Note : catalyzes the removal of sulfur from cysteine to form alanine DNA sequence : ATGAAGCAAGTCTATTTAGACAACAATGCAACAACAATGCTTGACCCAAGTATCAAGCCGCTTATGGAGCCGTATTTTTG CGAGAAGTTTGGGAATCCAAATAGTCTCCACAAATATGGCACACAAACTCACGCAGCTATATCAGAAGCAATTGAAAAAC TCTATAAAGGTATCAATGCCGATGATAATGATGATATTATTATTACCAGCTGTGCAACAGAATCCAATAATTGGGTGATA AAGGGCGTGTATTTTGATGAGATTGTTAAAAAGGGTAAGAGGCATATTATTACCACAGAGGTTGAACACCCAGCAGTGCG TGCTACTTGTGCCTTTTTAGAAACTCTTGGCGTGGAGGTTACTTATTTACCTATTAATCAGCAAGGCACAATTACTGCCA AACAAGTGCGAGAATCTTTGCGTGAAGATACTGCTCTTGTAAGTGTAATGTGGGCAAATAATGAAACAGGACTTATTTTC CCTATTGAGGAGATAGGCACACTTTGTCGGCAAAATAATGTTCTTTTTCACACTGATGCAGTGCAAGCTATTGGTAAGAT TCCTGTTGATGTCCAAAGTGCACAGGTAGATTTTTTAAGCTTTAGTGCACATAAGTTTCACGGACCAAAAGGTGTTGGTG GTTTATATATTCGTAAGGGTATTGAGCTCACTCCTCTTTTTCACGGCGGCGAGCATATGCGTGGCAGACGCAGCGGCACA CTCAATGTCCCTTATATTATTGCAATGGGTGAAGCGATGAAATTAGCGAATGATTATCTTGATTTTGAGCTTTCTCAAGT AAAGAATCTGCGTGATAGATTAGAATCTGCTCTTTTAGAGATTCCCGATGTGTTTGTGGTTGGCACAAGAGATAATCGTG TGCCAAATACGACACTCATTAGTATAAGAGGAATTGAGGGCGAAGCTATGCTATGGGATTTGAATAAGGCAGGTATAGCT GCTTCTACAGGAAGTGCTTGTGCAAGCGAGGATTTGGAAGCAAATCCTGTTATGGTCGCTATTGGTGCAGATAAAGAGCT TGCTCATACTGCTATTAGAATCTCTTTGAGTAGATTTACTACAAGCGAAGAGATTGATTACACTATTGAGGTGTTTAAGA AAGCGGTGCAGAGGCTTAGAGCGATTTCTAGCTCGTATGAAAGCTAG Protein sequence : MKQVYLDNNATTMLDPSIKPLMEPYFCEKFGNPNSLHKYGTQTHAAISEAIEKLYKGINADDNDDIIITSCATESNNWVI KGVYFDEIVKKGKRHIITTEVEHPAVRATCAFLETLGVEVTYLPINQQGTITAKQVRESLREDTALVSVMWANNETGLIF PIEEIGTLCRQNNVLFHTDAVQAIGKIPVDVQSAQVDFLSFSAHKFHGPKGVGGLYIRKGIELTPLFHGGEHMRGRRSGT LNVPYIIAMGEAMKLANDYLDFELSQVKNLRDRLESALLEIPDVFVVGTRDNRVPNTTLISIRGIEGEAMLWDLNKAGIA ASTGSACASEDLEANPVMVAIGADKELAHTAIRISLSRFTTSEEIDYTIEVFKKAVQRLRAISSSYES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 1e-52 | 42 |
