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Name : rnhA (HH0698) Accession : NP_860229.1 Strain : Helicobacter hepaticus ATCC 51449 Genome accession: NC_004917 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 678422 - 678868 bp Length : 447 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : TTGATAATGAAACAAGTTACTCTTTATTGTGATGGTAGTGCACTTGGAAATCCCGGTGCTGGAGGCTGGTGTGGCATACT CTCTTTTGGTGATAAGCAAAAGATTCTTACAGGTGGCGAAACCTATACAACAAATAATCGTATGGAACTCCTTGCAGTGA TAGAATCTCTCAAAGCTCTTAATCAACCTTGCATTGTGAATGTATATAGTGATTCTCGCTATGTATGCAATGGTATCAAC TTATGGCTTAAATCGTGGATTTCTAAGCAATTTAAAAATGTCAAAAATCCTGATTTATGGCAACTATATTTACAAGTTTC ATCACCTCATCAAGTGATTGCACATTGGGTAAAAGGACACGCGGGAGTAGCACAAAATGAACTATGTGATAAACTTGCAA AAGAAAGTGCGCAATTTTATTTAAATAAAGGAATTTCTGATGAGTAA Protein sequence : MIMKQVTLYCDGSALGNPGAGGWCGILSFGDKQKILTGGETYTTNNRMELLAVIESLKALNQPCIVNVYSDSRYVCNGIN LWLKSWISKQFKNVKNPDLWQLYLQVSSPHQVIAHWVKGHAGVAQNELCDKLAKESAQFYLNKGISDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 5e-22 | 44 |
