Gene Information

Name : RB2588 (RB2588)
Accession : NP_865043.1
Strain : Rhodopirellula baltica SH 1
Genome accession: NC_005027
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 1346519 - 1347244 bp
Length : 726 bp
Strand : -
Note : PMID: 10360571 best DB hits: BLAST: pir:E72385; hypothetical protein TM0375 - Thermotoga maritima; E=7e-42 gb:AAD39011.1; (AF026270) PduL [Salmonella enterica serovar; E=3e-32

DNA sequence :
ATGAGCTTGGCTGTCGATCGTTCACGCATTGAATCCCTCGTTCGCAACGCGATCCGTCAATCGGGTTTGGCAACGGCTGC
ACCGTCAGTCGGATCCGCCGGACAGCAACCTCTTGGTTGGGTCGACGGCAAACCGAACTTGCGTGTCAGCATTTCCGCCC
GCCACTGCCACCTGACCGACGAACACGTCGAGATCCTGTTCGGCCGCGGCAGCGTTTTGGAACCCGACAAAGACCTTTAC
CAAGACGGCTTTTACGCCGCCAAGCAAACCGTAATGGTCGTCGGACCTCGCAAACGGATGCTCCCCAGCGTCCGCGTGCT
CGGACCAACGCGTGGAGCCAGCCAAGTCGAACTCGCACTGACCGATTCGATCTCGTTGGGCATCAACGCACCGGTTCGCC
ACAGCGGCAAAATCGATGGCACGCCCGGATGCGTGTTGGTCGGTCCTGCCGGCAGCGTTCAGCTCGAACAAGGCGTCATC
CGCGCTGCTCGCCACGTCCACATGAACTACGCCGACGCCGAGTACTACGGCGTCAGCAACGGCGACATGATGCAACTTTC
GGTTCGCAGCCCTGACTGCAGCGTCTCGTTCGAAGACGTTTTGGTTCGCGCCGATGAAGCGGCCAAATTGGAAGTTCACA
TCGACACGGACGAAGGCAACGCTTGCAACCTGGATGCAGCGACCAGCGTTGAACTGAAGAAATCAGGCTGTGCTTGCCAG
CACTGA

Protein sequence :
MSLAVDRSRIESLVRNAIRQSGLATAAPSVGSAGQQPLGWVDGKPNLRVSISARHCHLTDEHVEILFGRGSVLEPDKDLY
QDGFYAAKQTVMVVGPRKRMLPSVRVLGPTRGASQVELALTDSISLGINAPVRHSGKIDGTPGCVLVGPAGSVQLEQGVI
RAARHVHMNYADAEYYGVSNGDMMQLSVRSPDCSVSFEDVLVRADEAAKLEVHIDTDEGNACNLDAATSVELKKSGCACQ
H

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42070.1 hypothetical protein Not tested PAI II 536 Protein 6e-31 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RB2588 NP_865043.1 transcriptional regulator VFG1589 Protein 3e-31 46