Gene Information

Name : RB4681 (RB4681)
Accession : NP_866245.1
Strain : Rhodopirellula baltica SH 1
Genome accession: NC_005027
Putative virulence/resistance : Unknown
Product : cold shock protein scoF
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2391934 - 2392131 bp
Length : 198 bp
Strand : +
Note : PMID: 90231432 PMID: 94293754 best DB hits: BLAST: swissprot:P48859; CSPF_STRCO COLD SHOCK PROTEIN SCOF -----; E=8e-10 embl:CAB76978.1; (AL159178) cold-shock protein [Streptomyces; E=2e-09 pir:T34593; cold-shock domain protein - Streptomyces coelicolor; E

DNA sequence :
ATGGCAGAAGGTACAATCAAACGGCTCACCGACAAAGGCTTCGGTTTCATCGACACTGGAGGGCCGAAAGACTTGTTCTT
CCACTGCACGAATGTCGAAGGCGCGAGTTACGACGAACTGCAAGAAGGTCAAAAAGTCACTTACACTGAAGGTCGCGGTC
CCAAAGGACCTTGTGCCGAAAACGTGACTCCTGCCTGA

Protein sequence :
MAEGTIKRLTDKGFGFIDTGGPKDLFFHCTNVEGASYDELQEGQKVTYTEGRGPKGPCAENVTPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-09 42