|
Name : rnH (RB10271) Accession : NP_869340.1 Strain : Rhodopirellula baltica SH 1 Genome accession: NC_005027 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 5552071 - 5552547 bp Length : 477 bp Strand : - Note : PMID: 1698262 PMID: 1311386 PMID: 6296074 best DB hits: BLAST: pdb:1RBR; Ribonuclease H (E.C.3.1.26.4) Mutant With His 62; E=1e-36 pdb:1RBT; Ribonuclease H (E.C.3.1.26.4) Mutant With Lys 95; E=2e-36 pdb:1RBV; Ribonuclease H (E.C.3.1.26.4) Mutant With Lys DNA sequence : ATGACCGATTCCAAAACCGAGGCTGCTTTCAAACCCGTGGAGCTGTACACCGACGGTGCTTGCAGCGGGAACCCGGGACC TGGCGGTTGGGCATTTGTGTTGCGTTGCCCGCGGACGCTGAAAGAGATCCAGCGTTCGGGCGGGCAACCTCACACGACCA ACAACCAAATGGAATTGATGGCCGTCATCCGTGGACTCGAAGCTCTCAAAGAACCTTGCGCTGTCGATCTGTATTCCGAC AGCAAATACGTCGGGCAGGGGATGTCGAGCTGGATGGCGGGTTGGAAAAGTCGCGGCTGGAAACGCAAAGACGGTTCCAA ACTGGTGCCCGTCAAGAATGTCGAACTGTGGCAGGAGCTCGATCAGCAAATGCAAGCTCACCGGGTGACCTACCACCACG TCAAAGGTCACGCCGGACACACCGAAAACGAACTGTGCGATAAATTGGCGGTCGCGGCGTACCAACAATATCTGTAA Protein sequence : MTDSKTEAAFKPVELYTDGACSGNPGPGGWAFVLRCPRTLKEIQRSGGQPHTTNNQMELMAVIRGLEALKEPCAVDLYSD SKYVGQGMSSWMAGWKSRGWKRKDGSKLVPVKNVELWQELDQQMQAHRVTYHHVKGHAGHTENELCDKLAVAAYQQYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 2e-28 | 54 |
