Gene Information

Name : lolD (RB1517)
Accession : NP_864457.1
Strain : Rhodopirellula baltica SH 1
Genome accession: NC_005027
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein lolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 776190 - 776879 bp
Length : 690 bp
Strand : -
Note : PMID: 7542800 best DB hits: BLAST: pir:D83271; probable ATP-binding component of ABC transporter PA2987; E=2e-50 swissprot:P45247; LOLD_HAEIN LIPOPROTEIN RELEASING SYSTEM; E=2e-49 pir:D83071; probable ATP-binding component of ABC transporter PA4594; E=2e-

DNA sequence : 
GTGTTGGTTGTTTCCGAGTTGTCAAAATCGTATCCCACCGCGGGTGAACCGTTGTCCGTCTTGCGAGGCGTCAACCTCGA
GCTTTCCCCAGGACAATCTGCCGCGATTGTTGGACCGAGCGGAAGTGGCAAGACAACGTTGCTGCAAATTCTTGGAACAC
TCGACGAACCTGACTCCGGCTCAGTCCAAATCAATGGACAAGATCCGTTTGCGCTCGATGCACGCGAGCGAGCCGCCTAT
CGAAATCAAACGATTGGCTTCATCTTTCAAGATCATCATCTGCTGCCACAATTGTCCGTGACAGAAAACGTTCTCATTCC
CGCATTGGCCAATGGAAAACCAACCAGCGACGACGTGTCACGCGCAGCAGAACTGATCGATGCCGTTGGATTGTCTCACC
GAGCCACGCATCTGCCTCGCGAATTGTCGGGCGGTGAACGCGAACGTGTGGCCATCGCGAGAGCCTTGCTGATGCAACCG
TCCGTTGTTTTGGCAGACGAACCGACTGGCAACCTGGATTCGAAAACTGCGAAGACGATCACAGAATTGCTTTTGCGTTT
GCAAGCGGAGCAGAACACGGTGTTGGTGACCGTCACGCACTCGCTGTCGTTGGCCGATGAAATGAACGAGCGTTTCGAGC
TGGTCGATGGTGCATTGGTACGCCGCGGACGATTCGGCATCACCGCATGA

Protein sequence : 
MLVVSELSKSYPTAGEPLSVLRGVNLELSPGQSAAIVGPSGSGKTTLLQILGTLDEPDSGSVQINGQDPFALDARERAAY
RNQTIGFIFQDHHLLPQLSVTENVLIPALANGKPTSDDVSRAAELIDAVGLSHRATHLPRELSGGERERVAIARALLMQP
SVVLADEPTGNLDSKTAKTITELLLRLQAEQNTVLVTVTHSLSLADEMNERFELVDGALVRRGRFGITA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD NP_864457.1 lipoprotein releasing system ATP-binding protein lolD NC_012469.1.7686878. Protein 4e-38 45
lolD NP_864457.1 lipoprotein releasing system ATP-binding protein lolD NC_008702.1.4606598. Protein 3e-34 44