Gene Information

Name : csoS1 (PMT1206)
Accession : NP_895036.1
Strain : Prochlorococcus marinus MIT 9313
Genome accession: NC_005071
Putative virulence/resistance : Virulence
Product : carboxysome shell protein CsoS1
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1294868 - 1295179 bp
Length : 312 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTAGCGAAACCATGGGCATCGCCCTAGGCATGATCGAAACCCGCGGCCTCGTGCCAGCAATTGAAGCTGCTGACGC
CATGACCAAGGCAGCTGAAGTGCGCCTGATTGGTCGTGAGTTTGTCGGTGGTGGATATGTCACCGTGCTCGTGCGTGGTG
AGACAGGTGCTGTGAACGCCGCCGTTCGTGCTGGCGCTGATGCTTGTGAGCGTGTTGGTGACGGCCTTGTGGCAGCGCAC
ATCATTGCTCGCCCTCATCGGGAAGTTGAGCCTGCGCTAGGCAACGGCAATTTCTTAGGTCAGAAGGACTGA

Protein sequence : 
MASETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPALGNGNFLGQKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 60
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
csoS1 NP_895036.1 carboxysome shell protein CsoS1 VFG1596 Protein 7e-12 60
csoS1 NP_895036.1 carboxysome shell protein CsoS1 VFG1597 Protein 1e-12 54
csoS1 NP_895036.1 carboxysome shell protein CsoS1 VFG1598 Protein 9e-12 52