Gene Information

Name : rplY (CV_4057)
Accession : NP_903727.1
Strain : Chromobacterium violaceum ATCC 12472
Genome accession: NC_005085
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L25
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1825
EC number : -
Position : 4387847 - 4388134 bp
Length : 288 bp
Strand : -
Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG1825

DNA sequence :
ATGTCTTACGAACTGATCGCCGCCAAGCGCGTTGACCTGGGTACGGGTGCGAGCCGCCGCCTGCGCCGCGCTGGCAAGCT
GCCGGCCGTGGTTTACGGCGCCGGCAAGGATGCCGTTTCCCTGGAACTGGATCACAACACCCTGTACCACGCCGTCAAGC
ACGCCGACTTCCACACCTCGGTGCTGGAACTGGTGATCGACGGCCAGAAGGAACAGGTTAAGGTTGCCGCGTTCCAGATG
CACCCGTACAAACAGCAAGTGCTGCACATCGACTTCGCTCGTGTGTAA

Protein sequence :
MSYELIAAKRVDLGTGASRRLRRAGKLPAVVYGAGKDAVSLELDHNTLYHAVKHADFHTSVLELVIDGQKEQVKVAAFQM
HPYKQQVLHIDFARV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01051 YP_001437155.1 50S ribosomal protein L25 Not tested Not named Protein 9e-17 47