Gene Information

Name : gvip288.1 (gvip288.1)
Accession : NP_925042.1
Strain : Gloeobacter violaceus PCC 7421
Genome accession: NC_005125
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism protein CcmK-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2248974 - 2249282 bp
Length : 309 bp
Strand : -
Note : -

DNA sequence : 
ATGCCTATTGCTGTTGGAATGATCGAAACCAAGGGCTTTCCGGCCATCGTCGAAGCGGCGGACGCGATGGTCAAGGCGGC
CCGGGTCACCCTGGTCGGTTATGAAAAGATTGGCAGCGGCCGGGTCACGGTGATCGTGCGCGGCGATGTTTCCGAGGTCC
AGGCTTCGGTTTCGGCGGGCGTCGAATCGGCCAAGCGGGTGAATGGCGGCGAGATACTTTCGACGCATATTATTGCTCGT
CCCCACGAGAACCTCGAGTACGTGCTGCCGATTCGCTACACCGAAGCGGTCGAGCAGTTCCGAACTTGA

Protein sequence : 
MPIAVGMIETKGFPAIVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGVESAKRVNGGEILSTHIIAR
PHENLEYVLPIRYTEAVEQFRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 8e-19 56
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-17 55
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-18 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gvip288.1 NP_925042.1 carbon dioxide concentrating mechanism protein CcmK-like protein VFG1596 Protein 3e-19 56
gvip288.1 NP_925042.1 carbon dioxide concentrating mechanism protein CcmK-like protein VFG1598 Protein 1e-17 55
gvip288.1 NP_925042.1 carbon dioxide concentrating mechanism protein CcmK-like protein VFG1597 Protein 4e-18 53