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Name : clpB (gvip486) Accession : NP_926523.1 Strain : Gloeobacter violaceus PCC 7421 Genome accession: NC_005125 Putative virulence/resistance : Virulence Product : endopeptidase Clp ATP-binding chain B Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3767764 - 3770382 bp Length : 2619 bp Strand : - Note : - DNA sequence : ATGCAGCCCAACAACCCGAACCAATTCACCGAGAAGGCCTGGGATGCGATCGTCCGCACCACCGAGGTAGCTAAGGAGTA CCGCCAGCAGCAGCTGGAGAGCGAACATCTTTTTAAGGCGCTCCTGGATCAAGACGGGGGGTTGGCCGGTTCGATTTTTA CCAAGGCGGGTGTGAACCTGACGAAGCTTGGCGAGCGGGTCGAGCAGTTTATCAACCGCCAGCCCAAACTCACCAACCCC GGCCAGAGCGTCTACCTCGGCCGCAGCCTCGACGCGCTGTTGGATCGCGCCGAGGGTTTCCGCAAAGAGTACGGCGACGA TTTTATTTCGATCGAGCACCTGGTGCTGGCCTTCGCCAAGGACGTGCGCTTCGGACAGCAGATTCTGCGTGAATTCAGCC TCGATGAAGCGAAGCTTAAAGCGGTCGTGGCCCAGGTGCGCGGCAACCAGAAGGTGACCAGCCAGAATCCTGAAAGCACC TACGAGTCGCTCGATAAATACGGCCGGGATCTGACCCAATTGGCCCGCGAAGGCAAGCTCGATCCGGTGATCGGCCGCGA CGAGGAGATTCGCCGCACCATCCAGATTCTCTCGCGCCGCACCAAAAATAACCCCGTACTGATTGGCGAACCCGGCGTGG GCAAGACGGCCATCGCCGAGGGGCTCGCCCAGCGCATCGTCAGCGGCGATGTGCCCGAGTCGCTCCAGGGCCGCAAGCTG ATCGCCCTCGACATGGGAGCACTGATTGCCGGATCTAAGTACCGGGGCGAATTTGAAGAACGGCTCAAGGCGGTCCTCAA CGAGGTGACCAAGTCCGAGGGGCAGATCGTCCTTTTTATCGACGAAATTCACACGGTCGTGGGTGCGGGTGCCACCCAGG GCGCCATGGACGCGGGCAATTTGCTCAAGCCGATGCTGGCCCGCGGCGAACTGCGCTGCATTGGGGCTACGACCCTCGAT GAATACCGCAAATACATCGAGAAAGACGCTGCCCTGGAGCGCCGCTTCCAGCAGGTCTACGTCGATCAACCCACGGTCGA GGACACCATTTCGATTCTGCGCGGCCTCAAAGAGCGCTACGAAGTCCACCACGGTGTGCGCATCTCCGACAGCGCCCTGG TGGCGGCGGCGGTGCTTTCTCATCGCTACATCAGCGACCGTTTTTTGCCCGACAAAGCGATCGACTTGATGGACGAGGCG GCGGCCAAGCTCAAGATGGAAATCACCTCCAAGCCCGAGGCCCTCGACGAGGTCGACCGCAAGATCCTGCAGCTGGAGAT GGAGCGGCTGTCGCTGGCCAAGGAGTCCGACGCCGCCTCGCGCGATCGTCTGGAGCGGCTTGAAAAAGAACTGGCCGACC TCAAAGAAGAGCAGCGCTCCCTCAACGCCCAGTGGCAGGCCGAGAAGGACATCATCGACCAGGTCCAGGCCGTCAAAGAA GAAATCGACCAAGTCAACGTCCAGATCCAGCAGGCCGAGCGCGACTACGACCTCAACCGCGCCGCCGAACTGAAATACGG CAAACTGTCCGAATTGCAAAAGCGCCTCGACGCGGCCGACAAACAACTGAGCGAGACCCAGACCAGTGGCCGGTCGCTGT TGCGCGAGGAGGTCACCGAGGAGGACATCGCCGAAATCATCTCCAAGTGGACCGGCATCCCGGTGAGCAAACTGGTGGCG AGCGAACGCGAGAAGCTGTTGCACCTCGAAGACGAGTTGCACAAGCGGGTGGTGGGGCAGGAAGAAGCGGTGCGGATTGT CTCTGAAGCCATTCAGCGATCGCGCGCCGGACTTGCAGACCCGAACCGGCCGATCGCGAGCTTTATTTTTCTGGGGCCGA CCGGCGTGGGCAAGACCGAGCTTGCCAAGGCGCTCGCGTCGTTTTTGTTCGACGACGAGAATGCCATGGTGCGCATCGAC ATGTCCGAGTACATGGAGAAGCACAGCGTCTCGCGGCTGATTGGTGCCCCCCCAGGCTACGTGGGCTACGACGAAGGCGG CCAGCTCACCGAGGCGGTGCGCCGCCGGCCCTACGCGGTGGTGCTCTTTGACGAGATCGAAAAAGCCCACAACGACGTCT TCAACGTGCTGTTGCAGGTGCTCGACGACGGGCGGATCACCGATTCGCAGGGCCGCACGATCGATTTCAAAAACGCAGTG ATCATCATGACCAGCAACATCGGCTCCGATGCGATCTTGCGCCTGGGCGGCAACGACGCCTACTACGAGCAGATGCGCGA GGAGGTGATGCGCGCCATGCAGGTCCACTTCCGGCCGGAATTTCTCAACCGCGTCGATGACATCATCATCTTCCGCAACC TGCGCCGCGATCAGCTCGCCGCCATCGTCAAGCTGCAGATCGCACGGCTGGAGAAGCGGCTGGCCGATCGCAAGATCACC CTCAAGCTCAGCGAGGCCGCCATCGACTACATCGTCGAGGCGGGCTACGACCCGGTCTACGGTGCGCGCCCCCTCAAGCG GGCCATCCAGAATGAACTGGTCAACCCGCTCGCCCGGGGATTGCTCAAGGGGGATTTTAACGACGGCGACACCATCTTTG TCGACATCGAGAACGAAAGGCCCGTCTTCCGCCGCCTAAGCGCCATGCCGGTTGTCTAG Protein sequence : MQPNNPNQFTEKAWDAIVRTTEVAKEYRQQQLESEHLFKALLDQDGGLAGSIFTKAGVNLTKLGERVEQFINRQPKLTNP GQSVYLGRSLDALLDRAEGFRKEYGDDFISIEHLVLAFAKDVRFGQQILREFSLDEAKLKAVVAQVRGNQKVTSQNPEST YESLDKYGRDLTQLAREGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGDVPESLQGRKL IALDMGALIAGSKYRGEFEERLKAVLNEVTKSEGQIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLD EYRKYIEKDAALERRFQQVYVDQPTVEDTISILRGLKERYEVHHGVRISDSALVAAAVLSHRYISDRFLPDKAIDLMDEA AAKLKMEITSKPEALDEVDRKILQLEMERLSLAKESDAASRDRLERLEKELADLKEEQRSLNAQWQAEKDIIDQVQAVKE EIDQVNVQIQQAERDYDLNRAAELKYGKLSELQKRLDAADKQLSETQTSGRSLLREEVTEEDIAEIISKWTGIPVSKLVA SEREKLLHLEDELHKRVVGQEEAVRIVSEAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALASFLFDDENAMVRID MSEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPYAVVLFDEIEKAHNDVFNVLLQVLDDGRITDSQGRTIDFKNAV IIMTSNIGSDAILRLGGNDAYYEQMREEVMRAMQVHFRPEFLNRVDDIIIFRNLRRDQLAAIVKLQIARLEKRLADRKIT LKLSEAAIDYIVEAGYDPVYGARPLKRAIQNELVNPLARGLLKGDFNDGDTIFVDIENERPVFRRLSAMPVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-107 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_926523.1 | endopeptidase Clp ATP-binding chain B | VFG2076 | Protein | 4e-117 | 43 |
| clpB | NP_926523.1 | endopeptidase Clp ATP-binding chain B | VFG2084 | Protein | 4e-111 | 41 |
