|
Name : secF (gvip550) Accession : NP_927113.1 Strain : Gloeobacter violaceus PCC 7421 Genome accession: NC_005125 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 4365644 - 4366570 bp Length : 927 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGAAAATTGAAGTCGCCAAGAGCAAGTCCAAGTGGTTTACCGCCTCCGGCATCGGACTGGGTATCGGTCTTGTCGCCAT GGTCATTTCGCTGCTCACCCTGGGCAGTCCCCTGCGTTTGGGCCTCGACTTCACCGGCGGCACGCTGCTGCAGCTGAAAT TTGTGAAGGCGATTCCAGACATCGCCAAGGTGCGCGCCGAGGTGGGCGAGGCGGGCTATCCCAACAGTGTCGTCCAGCAA ATCGGCTCAGACACTATCGCCGTGCGTACCCGGCCCCTCAGCCAGCCGGAGCGCAGCAAGCTTCAGGACGCCCTGAAAGC CGATCTGGGCAACTTTCAGCTGGAGCGCATCGAGAGCGTCGGCCCCACCCTCGGCCAGGAACTGCTATTTAACGGCCTGT TGTCGCTGGCCCTCGCCCTGGCGGCCATCCTCGTCTACCTGGCCTTTCGCTTTCAGCTCGACTACGCCATTTGCGCCGCC GTCGCCATGTTCCACAACGTCATTGCGACGATGGGCGTCTTCGCCATTCTGGGACTGCTTTTGGGCATCGAAGTCGACAC GCTCTTCGTGGTCGCCATCCTCACGATCGTGGGCTTCTCGGTGCAGGACACCGTGGTCGTTTTCGACCGCGTGCGCGAAA ATCTGAAGTTCCTCTCGCGCAAGAAACCCTTCCCCGACATCGTCAACGACTCGGTCAACCAGACCTGGGTGCGCTCGGTC AACAACAACATCGCCGCCCTGCTGGTGCTGCTGCCGCTGTCGATCTTCGGCGGCGAGAGTATCCGCTACTTCGCCCTGGC GCTGATCATCGGCTTTGTAGTGGGCACCTACTCCAGCATCTTCATCGCGGCGGCCCTGCTGGTCTGGTGGCGCGAGCGCC AGACGGTGGGTGCGACAGGAGCCGGGGCGGCCAAAGCCGAGCGCTAA Protein sequence : MKIEVAKSKSKWFTASGIGLGIGLVAMVISLLTLGSPLRLGLDFTGGTLLQLKFVKAIPDIAKVRAEVGEAGYPNSVVQQ IGSDTIAVRTRPLSQPERSKLQDALKADLGNFQLERIESVGPTLGQELLFNGLLSLALALAAILVYLAFRFQLDYAICAA VAMFHNVIATMGVFAILGLLLGIEVDTLFVVAILTIVGFSVQDTVVVFDRVRENLKFLSRKKPFPDIVNDSVNQTWVRSV NNNIAALLVLLPLSIFGGESIRYFALALIIGFVVGTYSSIFIAAALLVWWRERQTVGATGAGAAKAER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 7e-29 | 41 |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 5e-29 | 41 |
