Gene Information

Name : plu2648 (plu2648)
Accession : NP_929883.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3102511 - 3103122 bp
Length : 612 bp
Strand : -
Note : Highly similar to ATP-binding component of ABC transporter

DNA sequence : 
ATGCGCGGACAAAGTTGTGCTATTGTCGGTGCTTCCGGTTCGGGTAAAAGTACTTTACTCAATATTCTTGGTTTACTGGA
TCAACCCTCTTCTGGATATTTTCAGTTTAGTGGCGTTAATATAACAAATGTTACTCCTAATGAACGGGCGAGAATAAGAA
ATCAGGAAATTGGTTTCGTGTTTCAGAGTTTTAATTTACTTCCCAGAATGCAGGCGTTGGATAATGTAGCGCTACCATTG
TTATATCGTGGATATTCTCGTTCTCTAGCTCGGCAGGAAGCGAAATACCAGCTTGAGTTGGTTGGTCTGGCGGGTCGTAT
TTACCATCGTCCGGCTGATCTCTCCGGGGGACAGCGGCAACGTGTTGCCATTGCCAGAGCCTTGGTTGGTAAGCCTTCTT
TGATTCTGGCAGATGAGCCGACAGGCAATCTCGATAGTGCTACAGCACGTGATATTATGGCACTTCTTCTGTCATTGAAC
CGTGAGCAAGGCGTTACGCTCGTCATGGTTACACATGATGAAGCCATAGCCAAAAATATGCAGCGCTGCCTCTATGTTAA
TGGTGGGCGGCTTTCCGAAACTGATCTGTGGCTGGATAGCCTCGATGCTTAA

Protein sequence : 
MRGQSCAIVGASGSGKSTLLNILGLLDQPSSGYFQFSGVNITNVTPNERARIRNQEIGFVFQSFNLLPRMQALDNVALPL
LYRGYSRSLARQEAKYQLELVGLAGRIYHRPADLSGGQRQRVAIARALVGKPSLILADEPTGNLDSATARDIMALLLSLN
REQGVTLVMVTHDEAIAKNMQRCLYVNGGRLSETDLWLDSLDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-24 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-23 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
plu2648 NP_929883.1 hypothetical protein NC_012469.1.7686878. Protein 7e-40 52
plu2648 NP_929883.1 hypothetical protein NC_008702.1.4606598. Protein 9e-35 49
plu2648 NP_929883.1 hypothetical protein CP001581.1.gene798.p Protein 4e-31 44
plu2648 NP_929883.1 hypothetical protein CP001581.1.gene598.p Protein 6e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
plu2648 NP_929883.1 hypothetical protein VFG2059 Protein 4e-14 42