|
Name : pdl (plu3159) Accession : NP_930389.1 Strain : Photorhabdus luminescens TTO1 Genome accession: NC_005126 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 3718571 - 3720448 bp Length : 1878 bp Strand : - Note : Similar to lipase of Photorhabdus luminescens, strain W14 DNA sequence : ATGAGCGAATTATGCCCAAGCGGCACTATTGATAGCCAAAAAATGACAGAAAATTGGGTGGAGTTTCAATTAGTTGATGA ACAAGGTAATCCATTAGTGAATATGCCTTATCGTCTGATAAGCAGCGGGAGGTTGCGAGATGAGCGCAAAGGTGTGACTA ATAATCAAGGATTGCTTCGGGAAGAAAACTTGTCATCTGATGCGGTAACGTTATATATCAGTGCTCAACCATTAGCTGAT GAAATGGAACAGCGTCCATTACGGGAAAAACGCAGTATTAGGGCGTCAGTTGTCAAACCAAAAGCAGAAACGGAAGGTCA TCAACACCGTTATGTGACAATTGGACAGATAAGTGATGGCTTGCCTGTCATTGATAAATGGATAGAGGAGAAACCGCCAC GTTATCATTTCCCAGACCCAGTACCGAAAGGTTTTCGTGTTCTCTCAACAAACTGCCGATATATTTTGGAAGTGTGCCCG TTTCGTGCATGGGTACTATTGTTACATCATCAGAAAGATTATTCCCTGGTGAATGCTTATAATTTGGCATTAATGGGATT GCTGTCATATTTTGATGATAATGTTGATATAGCCGGTTCTATTACTCATTTTTTTAACCGACAAATGCTGGATATATCCC AATTACCGAGTAAGGTGGAAAAAATATCACGTACGCCCATTGTTTATGATGTGCCATTTAGTGAACGTTATACTGATGTT GTATTTATTGATTCAAAAGCGGGTGAAAGTGGGATAGGAGATACGGAGTTATTTTATGTCGCTAATCAACAGGAAATTAT TGTTAGCTGGCGGGGAACGGCGAGTGTCAATGACGCCCTCACTGACATTATGTATCAACCATTGAAATTGGGTTGTGAGC CAGACGGTGTATGCAGTGGTTTTATTAATAATGGTAAGGTTCATCGGGGTTTTTGGGAGGCATTTAATCTTATTGGTCAG TTAAAAGCTCCCGGTTCTGATGAAAATGTGTTTGATAAAGTTATTGATTTAGCTAGAAGTCGAAACTTATTTATTTGTGG ACACAGTTTGGGGGGCGCTTTAGGGTTATTACATAGTGCCCAACTGAAAAAATATCATCCTTGCTTATATAGTTATGGGA TGCCGCGGACATTAACCCGTAGTGCAGTACAAGAATTAGAAGAAATTACACATTACCGTCATGTGAATGAAAATGATCTA GTCCCCTCTATGCCCCCGGAAAAAGACTTAGATAATTGGCTTTATAATTATTGGGGGCCTTTGGGTTATCTATTTAGTAC TATTGAATTGTTAGGTTTAACAAACGGTCAGGAAGTTTTCTTGCATCATGGGGAAATCGTTCACTTTTATAAAGCTGATC TCATTATTGAAACTTTAAAAAAGAGTGATTCAAACGATCTTATACGGCTCACAGAAATATTACCTGTCATGGCAAAATTG TATTTGATTCCGTCATTGAATAATGAAACGAAAGATAATATGAAGGTGGCATTGGAGATTCAGAAAGAATTTTTTAAACA GATAAGCGACGCTGATAAGAACAAATGGTTTCCACGTAATGCAAACCCGACTTTGAAATATGCCTTGGGGGTGCCTGATC ATCGTATGCTTAAATATATTCATTACATTGGCGATCGAATTGCAGAGTTGTTTGCGCCAGACAAATATTATTTTTATCAA GATCAGAAGCAATTATTTGAAAATACAATGAATGAAAGGAGTGATATTATTCCTGATATTCGGCAACGTAATACACTATT TTTGAATATGGATAACCAGTTAGAACAAGCACTTATTGATACTTTACAAGATAAACAGAGTATTTTGGCCTTAACGCGTT ATACCAATATTGCCACACGGATTGAGAAAGAGTTATGA Protein sequence : MSELCPSGTIDSQKMTENWVEFQLVDEQGNPLVNMPYRLISSGRLRDERKGVTNNQGLLREENLSSDAVTLYISAQPLAD EMEQRPLREKRSIRASVVKPKAETEGHQHRYVTIGQISDGLPVIDKWIEEKPPRYHFPDPVPKGFRVLSTNCRYILEVCP FRAWVLLLHHQKDYSLVNAYNLALMGLLSYFDDNVDIAGSITHFFNRQMLDISQLPSKVEKISRTPIVYDVPFSERYTDV VFIDSKAGESGIGDTELFYVANQQEIIVSWRGTASVNDALTDIMYQPLKLGCEPDGVCSGFINNGKVHRGFWEAFNLIGQ LKAPGSDENVFDKVIDLARSRNLFICGHSLGGALGLLHSAQLKKYHPCLYSYGMPRTLTRSAVQELEEITHYRHVNENDL VPSMPPEKDLDNWLYNYWGPLGYLFSTIELLGLTNGQEVFLHHGEIVHFYKADLIIETLKKSDSNDLIRLTEILPVMAKL YLIPSLNNETKDNMKVALEIQKEFFKQISDADKNKWFPRNANPTLKYALGVPDHRMLKYIHYIGDRIAELFAPDKYYFYQ DQKQLFENTMNERSDIIPDIRQRNTLFLNMDNQLEQALIDTLQDKQSILALTRYTNIATRIEKEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pdl1 | AAL18491.1 | Pdl1 | Not tested | tcd island | Protein | 2e-159 | 55 |
| pdl2 | AAO17208.1 | Pdl2 | Not tested | tcd island | Protein | 6e-153 | 55 |
