|
Name : xerC (plu3704) Accession : NP_930912.1 Strain : Photorhabdus luminescens TTO1 Genome accession: NC_005126 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 4359526 - 4360656 bp Length : 1131 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGGCAAACCGTAAACCCCGCAAGGGGAGCCTTCTGACCGTTAATGACGTCTACCGTCAGCCTGTGGGGCCGGCGCATGA CCCGAAGAGCCTGTATGCGTTGTTGCTGCGCTTTGTAGTGTGGCGACAGGAACGGAGCTGGTCAGAAAGTACGCTGAAAG TACAGACGCACCATACTTACCACTTTATCCTGTGGGCAACCGAGCGCGGCTTATACTACGCAGCGGATATCACCCGGCCG ATACTGGAGCGTTACCAGCGTTATCTGTATCAGTACCGCAAGACCAACGGTGAACCGTTAAGCACCCGGACGCAACGTAC CCAACTGGAGCCATTGAAAGTCTGGTTCAAATGGCTGACCAAACAGAATCTGATACTGGCGAACCCGGCGGCGGACATTG AACTCCCCAGACTGGAAAAGCACCTGCCGCGCTATATCCTGACCATCGATGAAACCGAACAGATACTGGCGCAGCCTGAC CTGACGACGTTGCAGGGGATACGTGACCGGGCGTTGATGGAGTTGCTCTGGTCAACCGGGATGCGTCGGGGCGAATTAAC CCGGCTGGATGTGTACAGCGTTGACGGAAAACGCAAAACGGTGACCATCCGGCAGGGCAAGGGGAATAAAGACCGGGTGT TGCCCCTCGGTGAACGGGCCTTAAGCTGGCTACAGCGCTATCAGCAACAGGTGCGGCCACAACTTATCGTCAATCCAGAC GTCAAGGCATTATTCGTCGCAATGGATGGGCTGGACGGCTTACAGGCTAACGGTATCAGCAATCTGGTGACAGCTTATAT CAACGCGGTGGGTATCGAGAAAAAAGGTGCCTGCCACCTGTTTCGGCACGCGATGGCGACGCAGATGCTGGAGAACGGCG CGGACCTGCGCTGGATACAGGCCATGTTAGGCCATGCCAGCGTGGAATCCACCCAGGTGTATACGCAGGTCTCTATCCGG GCCTTGCAGGCGGTGCACGCCAGTACGCATCCGGCGGAGCAAATGGCCGACGAAAAAGTCCGCGACGCCGATGAGGTGGG TTTACTGGCCGACCTGTACGCCGACGATAACGCCGACACGGACACGCCGCCGGACAGTTCAGAGCCGACCTCAACCGCCG ATAGCCGCTGA Protein sequence : MANRKPRKGSLLTVNDVYRQPVGPAHDPKSLYALLLRFVVWRQERSWSESTLKVQTHHTYHFILWATERGLYYAADITRP ILERYQRYLYQYRKTNGEPLSTRTQRTQLEPLKVWFKWLTKQNLILANPAADIELPRLEKHLPRYILTIDETEQILAQPD LTTLQGIRDRALMELLWSTGMRRGELTRLDVYSVDGKRKTVTIRQGKGNKDRVLPLGERALSWLQRYQQQVRPQLIVNPD VKALFVAMDGLDGLQANGISNLVTAYINAVGIEKKGACHLFRHAMATQMLENGADLRWIQAMLGHASVESTQVYTQVSIR ALQAVHASTHPAEQMADEKVRDADEVGLLADLYADDNADTDTPPDSSEPTSTADSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAN64203.1 | Int | Not tested | macrophage toxin pathogenicity island | Protein | 9e-55 | 44 |
