Gene Information

Name : VVA0980 (VVA0980)
Accession : NP_937036.1
Strain :
Genome accession: NC_005140
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1089325 - 1091889 bp
Length : 2565 bp
Strand : -
Note : -

DNA sequence :
ATGGCATCTCTTTCACTATCCGCGTTAGTTGACAAGTTAACCCCTGAAGCGAAAAGAGCATTAGAGCAAGCCGCTGCTTT
GGCGAGCTCAAGAACCCACCACAGTATTGAAATGACACATTGGCTGCTTACGCTAGTGCAAAGTGCTGGGCCTGATGAAA
TCGAACTGTATCGTTCGTTTAAGGTTGATCTGAACCAACTGCAGACAGATTTCACGTTGCAATTAGAGAAGTACAAAACG
GGCTGCCAAACTGTGCCGGGGTTGTCATCCCATACGGTCACCATACTACAGAATGCATGGATGACAGCGACGATTGCGTT
TGAAGCAGAAAAAATTGCTGCTGTTCATTTGCTTCATGCCTTCCTCTCTGACGACACGCTGTTTGCCCTATCTTCGACAG
TAAGCAAAGAGCTAAGCAAAATTCAACCTAGCGCGTTAATCGAATACGCTCAGACTCATGTTGAACTGGCTAATGAACTA
CCCAGCCACAGGGCTTCTACACAAGCGTTGGATCAATTTACGATAGATCTGACAGAGCAAGCAGAGCTGGGCCAAATTGA
TCCGGTGATTGGTCGCGATGATGAAATTCGGCTGATGACGGATATTCTTCTGCGACGCCGTCAAAATAACCCTATCCTGA
CGGGTGAGGCGGGGGTAGGTAAAACCGCCGTTGTCGAAGGACTTGCGCTAAAAATCGCTCAAGGGGATGTGCCTCCCGCG
CTTAAAGCGGTGAGAATTAAATCACTTGATTTGGCGCTACTCCAGGCCGGTGCTGGTATGAAGGGCGAGTTTGAAAATCG
ATTGAAGAACGTGGTCAAAGAAGTCAAAGAGTCTGCGGTACCTATCGTACTGTTTATCGATGAAGCGCATGGATTGATTG
GTGGAGGGGCGCAGGCTGGTCAAGGTGATGCTGCGAACATACTTAAGCCCGCCTTAGCCAGAGGAGAGCTACGCACGATC
GCCGCAACCACATGGGCTGAATACAAAAAATATGTAGAGAAAGACGCAGCTCTGACCCGTCGTTTTCAAGTGGTTAAAAT
AGAGGAACCTTCACCTGAATTGGCGATAGAGATGCTGCGTGGCCTCGTTCCTGTCATGGAAAAACATCATGGCGTCCACA
TTACTACCGAGGCACTCAAGGCTGCCGTCTTTCTTTCTTCTCGCTACATTAGCGGCCGTCAGTTGCCAGACAAGGCGGTA
TCGGTTTTAGATACCGCGTGCTCTCGTGTTGCTTTGAGTCAAAACTCGATACCAGGGCTGCTTGATCAGAAATACAAAAA
ACGCCAAATGATAGAAGCTCAACAGCTTCAGCTCACCAATGAACTTGCATTTGGTCATTCTCATCAAACAGCTCTTGACG
AACTTGAGAGCAAGTTGTCGCTCCTTCAAAATGAAATTCACCAACTAGAGACAACGTGGCGAGATGAAGAAGGCGCAGTC
AAGCAGGCCAAAGCGCTCCGTGATTCCATTTTGGCAGAACCATCTGCAGAGAAAGCCAATCAGCTGCAATCCATTGAACA
GCAGCTATCGTCTAACCCGATGCCTTTGGTGTTTTCGCATGTTAACGAAGCCCTAATCGCTGAAATTATTGCAGGCTGGA
CAGGCATACCATTAGGCAAACTAAAAAGCGATGAAATAAAAGCGATTCTAGACTTACAGCAACATCTGCAAGAGCGAGTG
GTCGGCCAAGATCACGCGTTGAGTAAAATGGCGGAAGTGATCAAAACCGCGAGAGCACAGCTCAATGAAGAATCAAAACC
TAACGGTATCTTTTTCTTGGTAGGCCCAAGTGGTGTCGGTAAAACGGAATCTGCGTTGGCCATTGCTGAGCAAGTGTATG
GTAGTGAAGAAAACATCACCGTCATTAACATGTCTGAATTTAAAGAAGAGCATAAAGTCTCGTTACTGCTGGGCTCTCCT
CCGGGCTACGTTGGGTATGGCGAAGGTGGTGTGCTAACGGAAGCCGTGAGAAGAAAACCTTACAGCGTCATATTGCTTGA
TGAAATGGAGAAAGCCCATCCGGGTGTACAGGATATTTTCTATCAAGTGTTTGATAAAGGCATGATTAAAGACGGTGAAG
GGCGAGACATCGATTTCAAAAACACCATCATTATCATGACTTCCAACTCTGGGACGGAAACAACAATGGAGTTATTCCAA
GATCCAGAGCTTGCTCCGGATCCGGAGGCACTCAAAGAAGCGCTACGAGACGATTTGTTACAGGATTTCAAGCCCGCTTT
TTTAGGTCGAGTGAATGTCATTCCTTATATCCCTTTGCACCGTGATGTATTGGAGAAAATCACCGCGCTGAAACTCTCCA
AAATTCAGAAGAGGATAAAAACAAACTATAAAGCAGAAGCGGTGATCAACGATCGCTTAATTAATAGTATTGTTGACAGC
TGCAATGAAACGGGCAGTGGCGCGCGTGCTCTTCAAAATGTGATTGAAAATAAGGTGCTGCCTAAAATATCTGAATCCGT
ATTAAATGCCATTCTTAATGATATAAGAATTAATAAAATTGAGATAGAAGGTGAAGTTGATGACTTGTCTATCTCAATCG
TCTAA

Protein sequence :
MASLSLSALVDKLTPEAKRALEQAAALASSRTHHSIEMTHWLLTLVQSAGPDEIELYRSFKVDLNQLQTDFTLQLEKYKT
GCQTVPGLSSHTVTILQNAWMTATIAFEAEKIAAVHLLHAFLSDDTLFALSSTVSKELSKIQPSALIEYAQTHVELANEL
PSHRASTQALDQFTIDLTEQAELGQIDPVIGRDDEIRLMTDILLRRRQNNPILTGEAGVGKTAVVEGLALKIAQGDVPPA
LKAVRIKSLDLALLQAGAGMKGEFENRLKNVVKEVKESAVPIVLFIDEAHGLIGGGAQAGQGDAANILKPALARGELRTI
AATTWAEYKKYVEKDAALTRRFQVVKIEEPSPELAIEMLRGLVPVMEKHHGVHITTEALKAAVFLSSRYISGRQLPDKAV
SVLDTACSRVALSQNSIPGLLDQKYKKRQMIEAQQLQLTNELAFGHSHQTALDELESKLSLLQNEIHQLETTWRDEEGAV
KQAKALRDSILAEPSAEKANQLQSIEQQLSSNPMPLVFSHVNEALIAEIIAGWTGIPLGKLKSDEIKAILDLQQHLQERV
VGQDHALSKMAEVIKTARAQLNEESKPNGIFFLVGPSGVGKTESALAIAEQVYGSEENITVINMSEFKEEHKVSLLLGSP
PGYVGYGEGGVLTEAVRRKPYSVILLDEMEKAHPGVQDIFYQVFDKGMIKDGEGRDIDFKNTIIIMTSNSGTETTMELFQ
DPELAPDPEALKEALRDDLLQDFKPAFLGRVNVIPYIPLHRDVLEKITALKLSKIQKRIKTNYKAEAVINDRLINSIVDS
CNETGSGARALQNVIENKVLPKISESVLNAILNDIRINKIEIEGEVDDLSISIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-157 46
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-125 45
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-125 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVA0980 NP_937036.1 chaperone ATPase VFG2076 Protein 5e-168 46
VVA0980 NP_937036.1 chaperone ATPase VFG2084 Protein 8e-144 45