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Name : glcD (RPA1130) Accession : NP_946481.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 1233699 - 1235192 bp Length : 1494 bp Strand : + Note : - DNA sequence : ATGACCATTCTGATGCCGGAGCCGGATCAGTCGGTGCTGGCCCGTCGCGACGAGATCATCGCGGCCTTGCGCAAGATCGT GCCGGGCGAGGGCGTGATCTCCAGTGCCGCGGAAATGAAACCCTACGAGTCCGACGGCCTGATGGCGTATCGGCAGCCGC CGATGGTCGTCGTATTACCGAGCACGACCAAACAGGTTTCCGAGGTGCTGCGCTATTGCCACCAGAACGGCATCAAGGTG GTGCCGCGTGGCTCCGGCACCTCGCTGTCCGGCGGCGCGTTGCCGCTCGCCGATGGCGTGCTGCTTGGCCTCGGCAAGTT CAAACGGATCCGCGAGATTGACTTCGACAACCGCGCCGTGGTGGTCGAGCCCGGAGTCACCAATCTGGCGATCAGCCAGG CGGTCGATCATGCCGGATTCTACTACGCGCCCGATCCGTCGTCGCAGATCGCCTGTTCGATCGGTGGCAACATCGCCGAG AACTCCGGCGGCGTGCACTGCCTGAAATACGGCATGACAACCAACAACGTCCTCGGCTGCGAAATCGTGCTGATGACCGG CGAGATCCTCAAGATCGGCGGCAAGGCGGCCGAATGCGCCGGCTACGATCTGATGGGCGTCATCACCGGTTCCGAGGGGC TGCTCGGCGTCATCACCGAAGTCACCGTGCGGATTCTGCGCAAGCCGGAAACGGCGCGGGCACTGATGATCGGCTTCCAG AGCGTCGAGGCGGCCGGACAGTGTGTGGCCGACGTCATCAGCGCCGGCATCATTCCGGGAGGCATGGAGATGATGGACAA GCCGGCGATTCACGCCGCCGAAGCCTTCGTTCATGCCGGCTACCCGCTTGACGTCGAGGCGCTGCTGATTATCGAGCTCG ACGGTCCGCAGGTCGAGGTCGATGAACTGATCAGCCGTGTCGAGGCGATAGCGCTCGGCTGCGGCTCGACCACCTGCCAG ATCTCCACCAGCGAGCAGCAGCGGCTATTGTTCTGGAGCGGCCGCAAGGCGGCGTTCCCGGCGGTGGGACGAATCTCGCC GGACTATCTGTGCATGGACGGCACGATTCCGCGCAAACAGCTGCCGCTGGTGCTGCGGCGGATGAACGAGATGTCCGAGA AATACGGCCTGCGCGTCGCCAACGTATTCCACGCCGGCGACGGCAATCTGCATCCGCTGATCCTGTATGATGCCAACAAG CCGGGCGAGCAGGACGCGGCCGAAGCCTTCGGGGCAGACATCCTCAAGCTGTGTGTCGAGGTCGGCGGCGTGCTGACCGG CGAGCATGGGGTCGGGATCGAGAAGCGCGATCTGATGCCGGAGATGTTCTCCGACATCGATCTCAACCAGCAGCAGCGGC TGAAATGCGCGTTCGACTCCGAAGGTCTGCTCAACCCCGGCAAAGTGTTCCCGACGCTCCACCGCTGCGCCGAGCTCGGA CGCATGCATGTCCACAAAGGCCAATTGCCGTTCCCGGATATTCCGCGGTTCTGA Protein sequence : MTILMPEPDQSVLARRDEIIAALRKIVPGEGVISSAAEMKPYESDGLMAYRQPPMVVVLPSTTKQVSEVLRYCHQNGIKV VPRGSGTSLSGGALPLADGVLLGLGKFKRIREIDFDNRAVVVEPGVTNLAISQAVDHAGFYYAPDPSSQIACSIGGNIAE NSGGVHCLKYGMTTNNVLGCEIVLMTGEILKIGGKAAECAGYDLMGVITGSEGLLGVITEVTVRILRKPETARALMIGFQ SVEAAGQCVADVISAGIIPGGMEMMDKPAIHAAEAFVHAGYPLDVEALLIIELDGPQVEVDELISRVEAIALGCGSTTCQ ISTSEQQRLLFWSGRKAAFPAVGRISPDYLCMDGTIPRKQLPLVLRRMNEMSEKYGLRVANVFHAGDGNLHPLILYDANK PGEQDAAEAFGADILKLCVEVGGVLTGEHGVGIEKRDLMPEMFSDIDLNQQQRLKCAFDSEGLLNPGKVFPTLHRCAELG RMHVHKGQLPFPDIPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-137 | 57 |
