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Name : cycK (RPA1921) Accession : NP_947266.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2154141 - 2156123 bp Length : 1983 bp Strand : + Note : - DNA sequence : ATGATCGCCGAGGCCGGGCACTACGCACTGGTTCTGGCGCTGGCTCTGGCGCTGATCCAGTCCACCGTTCCGCTGCTCGG CGCCCGGCTCAATGACGGCGCGCTGATGAATGTGGCGCGCTCGACCGCGCTGGTGCAGCTGTTGTTCGCCGGCCTGTCGT TCACCGCGCTGGTGTGGCTGCACGTCACCTCCGACTTCTCGGTGGTGAACGTGTACGAGAACTCCCACTCGATGAAGCCG CTGCTCTACAAGATCACCGGCGTGTGGGGGAACCACGAAGGCTCGATGCTGCTGTGGGTCGCGATCCTGGCGCTGTTCGG CGGCCTGGTCGCGGCGTTCGGCAACAATTTGCCGCTGTCGCTGCGCGCCCACGTGTTGGCTGTTCAGGGCTGGGTCGCAA CCGCGTTCTATCTGTTCATCCTGATCACCTCGAACCCGTTCGCGCGGATTGCCAATGCGCCGGCCGAGGGCCGCGATCTC AACCCGGTGCTGCAGGATATCGGTCTCGCGGTGCATCCGCCGATGCTGTACCTCGGCTATGTCGGGTTCTCGATTTCGTT CTCGTTCGCCGCCGCTGCGCTGATGGAAGGCCGGCTCGACGCCGCCTGGGCTCGCTGGGTGCGGCCGTGGACACTGGTCG CCTGGATCTTCCTCACCCTCGGCATCGCGATGGGCTCGTATTGGGCCTACTACGAACTCGGCTGGGGTGGCTGGTGGTTC TGGGACCCGGTCGAGAACGCCTCGCTGATGCCGTGGCTCGCCGGCACCGCGCTCTTGCACTCGGCGCTGGTGATGGAGAA GCGCAACGCGCTGAAGGTCTGGACCATCCTGCTGTCGATCCTGACCTTCTCGCTGTCGCTGCTCGGCACCTTCCTGGTGC GCTCCGGCGTGCTCACCTCGGTGCACGCCTTCGCCACCGATCCGTCGCGCGGCGTGTTCATCCTGATCATCCTGTGCGTG TTCATCGGCGGCAGCCTGACGCTGTTTGCCTGGCGGGCCTCGTCGCTGAAGCAGGGCGGCCTGTTCGCGCCGATCTCGCG CGAAGGCTCGCTGGTGCTGAACAATCTGTTCCTCACCACCGCCTGCGCCACCGTGTTCGTCGGCACGCTGTATCCGCTGG CGCTGGAAGTGCTGACCGGCGACAAGATCTCGGTCGGCGCGCCGTTCTTCAATCTCACCTTCGGCCCGCTGATGGTGCCG CTGCTGGTCGCGGTGCCGTTCGGCCCGCTGTTGGCCTGGAAGCGCGGCGATCTGGTCGGCGCCGCGCAGCGGCTGATCGC CGCCGGCGTGGTGGCGCTGCTGGCGGTCGCCTTCGTATATGCCTGGGTCCATGGCGGCGCGGTGCTGGCACCGCTGGCGA TCGGGCTTGCGGTGTTCGTCATCATCGGCGCGCTGGTTGACATCGCCGAGCGCATTGCGCTGTTCCGCGGTCCGCTGTCG ATCTCGCTGCGCCGCGCCTCCGGCCTGCCGCGCTCGGCCTGGGGCACGATGTTCGCCCATGCGGCGCTCGGCGTGACGCT GATCGGCATCGTCTGCGAGACCACCTGGAACAGCGAGTACATCGCCGCGATGAAGCCGGGCGACAGCACCAAGCTCGCCG GCTACGAGTTCAAGTTCGAAGGCGCCAATCAGCGCCAGGGACCGAACTATCGCGAGTTGCTGACGCAGTTCACGGTGACC GAGAACGGCCGGCTGGTCGGCGGCATGGCGCCGTCGAAGCGCAGCTTCATCACCCGCGGCTCCTCCACCACCGAGGCGGC GCTGCTGACCCGCGGCTTCAGCCAGCTCTACATCTCGCTCGGCGATCTCAACGACCAGGGCGCGGTGACGGTGCGGATCT ATCACAAGCCGATGGTGCTGCTGATCTGGTTCGGCCCGATCCTGATGGCGCTCGGCGGCCTGCTGTCGCTGTCCGATCGC CGCTTGCGGGTCGGCGCGCCGAAGCCCGCCAAGGCGCCGCGCGTGCTGCAGCCGGCCGAGTAG Protein sequence : MIAEAGHYALVLALALALIQSTVPLLGARLNDGALMNVARSTALVQLLFAGLSFTALVWLHVTSDFSVVNVYENSHSMKP LLYKITGVWGNHEGSMLLWVAILALFGGLVAAFGNNLPLSLRAHVLAVQGWVATAFYLFILITSNPFARIANAPAEGRDL NPVLQDIGLAVHPPMLYLGYVGFSISFSFAAAALMEGRLDAAWARWVRPWTLVAWIFLTLGIAMGSYWAYYELGWGGWWF WDPVENASLMPWLAGTALLHSALVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVLTSVHAFATDPSRGVFILIILCV FIGGSLTLFAWRASSLKQGGLFAPISREGSLVLNNLFLTTACATVFVGTLYPLALEVLTGDKISVGAPFFNLTFGPLMVP LLVAVPFGPLLAWKRGDLVGAAQRLIAAGVVALLAVAFVYAWVHGGAVLAPLAIGLAVFVIIGALVDIAERIALFRGPLS ISLRRASGLPRSAWGTMFAHAALGVTLIGIVCETTWNSEYIAAMKPGDSTKLAGYEFKFEGANQRQGPNYRELLTQFTVT ENGRLVGGMAPSKRSFITRGSSTTEAALLTRGFSQLYISLGDLNDQGAVTVRIYHKPMVLLIWFGPILMALGGLLSLSDR RLRVGAPKPAKAPRVLQPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-83 | 46 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-103 | 45 |
