|
Name : glcB (RPA4216) Accession : NP_949552.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Unknown Product : malate synthase G Function : - COG functional category : C : Energy production and conversion COG ID : COG2225 EC number : - Position : 4759508 - 4761682 bp Length : 2175 bp Strand : + Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA DNA sequence : ATGAATCGTATTGACGCCCACGGACTGAAAATCGCGCCTGTGCTGTTCGACTTCATCGCCAAGGAGGCCGCGCCGAAAAC CGGCATCGCTCCCGACGTATTCTGGGCCGGCCTCGCTGCGATCGTTCGTGATCTGGCGCCGAAGACCCGCGCGCTGCTGA AGACCCGCGACGACCTGCAGGCCAAGATCGATGCGTGGCATCTCGCCAACAAGGGCAAGAAGCAGGACATGGCGGCCTAC ACTACCTTCCTGAAGGAGATCGGCTACTTGCTGCCCGAGCCGCCGACCGTGCCGGTCGAGACCACCAATATCGACGAAGA GATCGGCAAGCTGTGCGGCCCGCAGCTCGTGGTACCGTTGTCGAACGCTCGCTACGCACTGAATGCCGCCAACGCGCGCT GGGGTTCGCTGTACGACGCGTTCTACGGCACCGACGCGATCCCGCAGGAAGCCACCCAGGCCAAGGGCTACGACAAGGCG CGCGGCGACAAGGTGATCGCCAAGGCCAAGGCGTTCCTCGACCAAGCCGCGCCGCTCGCGACCGGCAGCCACAGCGACGT CACTGGTTACAGCGTGATCGCCGGCCAGCTGTCGGCCAAGCTGAAGAGCGGCAATGCCACCGGCCTGAAGAAGCCGGCGC AGTTCGCCGGCTTCCGCGGCGATGCCGCCAATCCGAGCGCGGTGCTGCTGGTCAACAACGGCCTGCACATCGAGATCAAG ATCGATCGCGCCAACACCATCGGCAAAGACGATCCGGCCGGCGTCGCCGACCTGGTCATCGAGTCGGCGGTGTCGACCAT TCTCGACATGGAAGACTCGGTCGCCGCCGTCGACGCCGACGACAAGGTGCTGATCTATCGCAACACCCTCGGCCTGATGG ACGGCACGCTGTCGGAAAGCTTTGAGAAGGGCGGCAAGACCGTTACCCGCGCGCTCAACGGCGACCGCACCTACACGGCG CCGGACGGCAAGGAAATCTCGCTGCACGGCCGCAGCCTGCTGCTGATGCGCAACGTCGGTCACCACATGTGGACCGATGC GGTGCTCGACAGCGACGGCCAGGAGATTCCGGAAGGCTTCCTCGACGCTGCGGTGTCAGGCCTGATCGCGATCCACGATC TCAAGCACCTCGGCAAGACCCGCAACAGCCGCACCGGCTCGGTCTACATCGTCAAGCCGAAGATGCACGGCCCGGATGAA GTCGCCCTCACCGTCGAGCTGTTCGGCCGCGTCGAGACCATGCTCGGCCTGACCGCGAACACCCTCAAGGTCGGCATCAT GGACGAGGAGCGCCGCACCACGGTGAACCTCAAGGCCTGCATCCAGAACGCGTCGAAGCGGATCGTCTTCATCAACACGG GCTTCCTCGATCGCACCGGCGACGAGATCCACACCTCGATGGAAGCGGGTCCGATGATCCGCAAGAACGAGATGAAGGCG CAGCCCTGGATCAAGGCCTACGAAGACTGGAACGTCGACACGGGTCTGGTCGACGGCCTGCCGGGTCACGCCCAGATCGG CAAGGGCATGTGGGCGGCCCCCGACAAGATGGCCGACATGCTGGCGCAGAAGATCGGTCACCCGCAGGCCGGCGCGACCA CCGCCTGGGTGCCGTCGCCGACTGCCGCGACGCTGCACGCGCTGCACTATCACCAGGTCGACGTGATCGCGCGCCAGCAG GAGCTGGCGAAGGGCGGCCCGCGCGCCAAGCTCGAGGACATCCTCACCATTCCGGTGTCGAACTCGAACTGGGCGCCGGA CGATGTCCGCCAGGAGATCGACAACAACTGCCAGGGCATCCTCGGCTACGTGGTGCGCTGGATCGACCAGGGCGTCGGCT GCTCCAAGGTGCCGGACATCCACGATGTCGGCCTGATGGAAGACCGCGCCACGCTGCGCATTTCCAGTCAGCACCTCGCC AACTGGCTGCATCACGGCGTCGTCACCAAGGAGCAGGTGCTCGACTCGCTGAAGCGGATGGCGGTGATCGTCGACAAGCA GAACGAAGGCGATGCGCTGTACCGGCCGATGGCGCCGGACTTCGACGGCGTCGCGTTCGAAGCCGCGTGCGACCTGATCT TCAAGGGCCGCGCGCAGCCGAACGGCTACACCGAATACATCCTGCATGAGCGCCGCCGCGAGGCCAAGGCCGCGCACCTG GAGTCGGCGCGCTAA Protein sequence : MNRIDAHGLKIAPVLFDFIAKEAAPKTGIAPDVFWAGLAAIVRDLAPKTRALLKTRDDLQAKIDAWHLANKGKKQDMAAY TTFLKEIGYLLPEPPTVPVETTNIDEEIGKLCGPQLVVPLSNARYALNAANARWGSLYDAFYGTDAIPQEATQAKGYDKA RGDKVIAKAKAFLDQAAPLATGSHSDVTGYSVIAGQLSAKLKSGNATGLKKPAQFAGFRGDAANPSAVLLVNNGLHIEIK IDRANTIGKDDPAGVADLVIESAVSTILDMEDSVAAVDADDKVLIYRNTLGLMDGTLSESFEKGGKTVTRALNGDRTYTA PDGKEISLHGRSLLLMRNVGHHMWTDAVLDSDGQEIPEGFLDAAVSGLIAIHDLKHLGKTRNSRTGSVYIVKPKMHGPDE VALTVELFGRVETMLGLTANTLKVGIMDEERRTTVNLKACIQNASKRIVFINTGFLDRTGDEIHTSMEAGPMIRKNEMKA QPWIKAYEDWNVDTGLVDGLPGHAQIGKGMWAAPDKMADMLAQKIGHPQAGATTAWVPSPTAATLHALHYHQVDVIARQQ ELAKGGPRAKLEDILTIPVSNSNWAPDDVRQEIDNNCQGILGYVVRWIDQGVGCSKVPDIHDVGLMEDRATLRISSQHLA NWLHHGVVTKEQVLDSLKRMAVIVDKQNEGDALYRPMAPDFDGVAFEAACDLIFKGRAQPNGYTEYILHERRREAKAAHL ESAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcB | CAE85241.1 | GlcB protein, malate synthase G | Not tested | PAI V 536 | Protein | 0.0 | 61 |
