|
Name : RPA0937 (RPA0937) Accession : NP_946290.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Unknown Product : extragenic suppressor protein SuhB Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0483 EC number : - Position : 1037232 - 1038020 bp Length : 789 bp Strand : - Note : observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished DNA sequence : ATGATCCATTCCGCCCTCATCAACGTCATGGTCAAGGCGGCGCGCCGCGCCGGCCGCAGCCTCAAGCGCGACTTCGGCGA GATCGAGAATCTCCAGGTGTCGCTGAAGGGCCCGGCAAACTTCGTGTCGCGCGCCGACAAGCGGGCCGAGGAGATGCTGT ACGAGGACCTGTCGAAGGCCCGGCCGGGCTACGGCTTCCTCGGCGAGGAAGGCGGCGTGCGCGAAGGCGCCGACAAGAGC CACCGCTGGATCGTCGATCCGCTCGACGGCACCACCAACTTCCTGCACGGCATCCCGCATTTCGCGATCTCGATCGGGCT CGAGCGCGAGGGCACGATGATCGCCGGCGTGATCTACAATCCTGCCAATGAGGAGCTGTACATCGCCGAGCGCGGCAAGG GCGCCTTCCTCAACGATACCCGCCTGCGAGTCGCCAATCGCCGTGAACTCCACGACTGCGTCATCGGCTGCGGCCTGCCA CATATCGGCCGCGGCGACTTCGCGCAGAACCAGCGCGAGATGGCCGCCCTGCAGCCGAAGGTCGCCGGCCTGCGCCGGTT CGGCACCGCCTCGCTCGACCTCGGTGCGGTCGCGGCCGGCCGCTTCGACGGCTTCTGGGAACGCAATCTGTCGCCGTGGG ACATCGCGGCTGGCATCGTGATGATCCGCGAAGCCGGCGGCACCGTCGGCGACATCAACGGCGGCGACGTTCTCAAGACC GGCGACATCGTCTGCGGCAACGAAACCATCCACGCCGAACTCGCGCGGATCCTGAAGCCGCTGAGCTGA Protein sequence : MIHSALINVMVKAARRAGRSLKRDFGEIENLQVSLKGPANFVSRADKRAEEMLYEDLSKARPGYGFLGEEGGVREGADKS HRWIVDPLDGTTNFLHGIPHFAISIGLEREGTMIAGVIYNPANEELYIAERGKGAFLNDTRLRVANRRELHDCVIGCGLP HIGRGDFAQNQREMAALQPKVAGLRRFGTASLDLGAVAAGRFDGFWERNLSPWDIAAGIVMIREAGGTVGDINGGDVLKT GDIVCGNETIHAELARILKPLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| suhB | AAT96064.1 | SuhB | Not tested | T-PAI | Protein | 2e-40 | 44 |
