Gene Information

Name : PAM_729 (PAM_729)
Accession : NP_950981.1
Strain : Onion yellows phytoplasma onion yellows
Genome accession: NC_005303
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 823075 - 823671 bp
Length : 597 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :

ATGCAAACAATGGAGGCAAACATGTATCACATTCCAATAGGAATCTCAGGAAGACACACTCACCTATCACAAGAAACACT
AGATATTTTATTCGGTCAAAAAAATTATCAACTCACTTTTTTCAAACCCCTCAAACAAACAGGACAATTTGCAGCCCAAG
AAAAAATTGATGTTATGAGTCCATCAGGAAAAATTCTTCCACAAGTTCGGATTTTAGGACCCACAAGACCTTTTGACCAA
GTAGAAATTAGTCAAAGCGATGCTTTAAGACACGGATTTACAGCTCCTGTTAGATCTTCAGGCGATATTAAAGGTTCAGG
CAAAGCCACTTTAATAGGTCTCAAAGGTCAAGTAGACATTGAAGAAGGTGTTATTATTGCCAACAGACATATTCATTTAT
CTACCCAAGATGCAAAAAATTTTGGCATTACTGACAAACAAATGGTAAGTATTGAAATTGAAGGCACTAAACCTGGCATC
TTAAAACAAGTTTTGTGCAGAGTACACCACGATTTTAAACTTGAATGCCACTTAGATACCGATGACGGCAGTGCTTTTTT
ACTTAAAAATGGCGATACTGTTAAATTACTGAAATAA

Protein sequence :

MQTMEANMYHIPIGISGRHTHLSQETLDILFGQKNYQLTFFKPLKQTGQFAAQEKIDVMSPSGKILPQVRILGPTRPFDQ
VEISQSDALRHGFTAPVRSSGDIKGSGKATLIGLKGQVDIEEGVIIANRHIHLSTQDAKNFGITDKQMVSIEIEGTKPGI
LKQVLCRVHHDFKLECHLDTDDGSAFLLKNGDTVKLLK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42070.1	hypothetical protein	Not tested	PAI II 536	Protein	1e-38	48

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PAM_729	NP_950981.1	hypothetical protein	VFG1589	Protein	4e-39	48