Gene Information

Name : PSPPH_1091 (PSPPH_1091)
Accession : YP_273360.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate transport protein fecA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 1284390 - 1286648 bp
Length : 2259 bp
Strand : -
Note : identified by match to protein family HMM PF00593; match to protein family HMM PF07660; match to protein family HMM PF07715; match to protein family HMM TIGR01783

DNA sequence :
ATGGCGCAGGCTGCCGAGGTGGCACCCAAGGCGTATCACATTGCGCCAAGCGAGCTTGAAGCTGCGCTGAGCCAGTTCGG
TCGAGAGTCCGGCGTGTTGATTTCCTATGGTTCGCAAATCACCAGCGGCCTGAAGAGCCGCGGCCTGGAAGGTCAGTACA
CGCCCGAGCAGGGCCTCAATGCGTTGCTCGAAGGCACCGGGCTGCAGGCCCTGGCCGACGGCAATAACGGCTTCACCCTG
CAACCGGTCAATGCTGCTGGCGCGCCTATCGAGCTGGGTGTGTCCACCGTGGTCGGCGACTGGCTGGGTGCCGCGCAGCA
GACCAACGTTTTCGAACACCCCGGCGCACGTGATGTGATCCGTCGTGAAGAATTCGAGCGTGTCGGCGCAACCTCGGCGC
GTGAAGTGCTCAATCGCATCCCGGGCGTCAATGCCCCGGACAACAACGGCACCGGCAGCCACGACATGGCGCTTAACTTC
GGCATTCGTGGCCTCAACCCGCGTCTGGCGTCACGCTCCACCGTATTGATGGACGGCATCCCGGTGCCGTTCGCACCTTA
TGGTCAGCCGCAGCTGTCCTTCGCGCCGATCAGCATGGGCAACATGGACGCGGTCGACGTGGTGCGTGGCGGTGGTGCTG
TGCGTTACGGCCCGCAGAACGTGGGCGGTATCGTCAATTTCGTGACCCGTGCCATCCCTGACGCACCCACCCTCAAAGGC
GGCATACAGACCGAAACCAGCCCGTCGTCCAGCCACGATGGCTTCAAGACCACCGGCAACCTGCTGGCAGGCGGCACGGC
GGACAATGGTCTGGGCGGCGCGATTCTGTATTCCGGCGTACGCGGCGGTGACTGGCGCGAGCACAGCGATACCCAGATCG
ACGACTTGATCCTCAAGGGCAAATACCAGATCGACGAAGCCAACAGCCTCAATGCCATGGCGCAGTATTACGATGGCGAA
GCGCAGATGCCCGGCGGCCTGAACGTCAGGGATTACGATGCCGATCCGTACCAGTCGACGCGTCTGAAGGACAAGTTCTG
GGGCCGTCGCACCATGTTCAACTTCGGCTACCGCTATGAAGAGGATGCCCGCGTCTTCACCGCCAACACGTTCTTCACCA
AGACCCTGCGCAGCGGCTATCTGGATCAGGGCAGCTTCGTCTCTCTATCGCCCCGCGAATATTGGGTACGCGGTCTGGAA
ACGCGCTTCTCGCAAGGCTTTGCACTGGGCGAGACCTGGCATGAAGTGGGCGTCGGCTACCGCTACGTCAACGAAGCGGG
TCACGAACTGCGCTATCGCGAACCGGTGACCGGCAACCTGCCGACTACCGCCAGCCGCAACGACCGTGACACCCGCGGCG
CGACTGAAGCGCATGCGTTCTACATTGATGACCGTATCGACATCGGCAAGTGGACCATCACGCCCGGCGTTCGCTACGAG
ATGATCGACACCGCGCAGAACAACAATCTGACCAACGCCCGCTATCAAGGCGACTACAGCACCGCACTGCCAGCGCTGAA
TGTGCTTTACCACCTCACCGACACCTGGAACCTGTACGCCAACACCGAAGGCTCGTTCGGCAGCGTGCAGTACAGCCAGA
TGCCTAACCGCGTTACCGGCGATGAAGTCAAACCGGAAAAAGCCCGCACCTGGGAGCTCGGCACGCGCTATGACAACGGC
AACCTGCGAGCCGAGATCGGTGCATTCCTGATCAACTTCGATAACCAGTACGACAGCAATCAGACCAACGACACCGTGAT
TGCACGCGGCGAGACTCGTCATCAGGGGATCGAGACCAGCGTCAACTATGCGCTGGAAGGCCTGAGCCCGGTATTGGCCG
GTTACGATGTCTACGCGAGCTACGCTTTCGTTGACGCGACAATCCGTGAAGACGGCCCGAACAAAGGCAACCGTGTGCCG
TTCTCGTCAAAACACAAAGGAACGATGGGCGTCAGCTACACCGAAGGGCCGTGGAAGCTGAATTTTGACAGCTCTTTCCA
GAGCGACCAGTTCGCCGACAACGCCAACACAGCGGCTGAGAGCGCCGACGGCAGCACTGGCAAGATCCCTGGGTACATGC
TGTTCAGCACCCGCGCCAACTACGATTTCGGCCCGCAATTGTCGGACCTCAACGTAGCGGTCGGGATGAAGAACATCTTC
AACCGCCAGTACTACACCCGCTCGTTCGACGACAACAACCGTGGCAAATACGTCGGCGAACCGCGCACGGTGTACGTACA
GACGTCAGTCGCATTCTAG

Protein sequence :
MAQAAEVAPKAYHIAPSELEAALSQFGRESGVLISYGSQITSGLKSRGLEGQYTPEQGLNALLEGTGLQALADGNNGFTL
QPVNAAGAPIELGVSTVVGDWLGAAQQTNVFEHPGARDVIRREEFERVGATSAREVLNRIPGVNAPDNNGTGSHDMALNF
GIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPDAPTLKG
GIQTETSPSSSHDGFKTTGNLLAGGTADNGLGGAILYSGVRGGDWREHSDTQIDDLILKGKYQIDEANSLNAMAQYYDGE
AQMPGGLNVRDYDADPYQSTRLKDKFWGRRTMFNFGYRYEEDARVFTANTFFTKTLRSGYLDQGSFVSLSPREYWVRGLE
TRFSQGFALGETWHEVGVGYRYVNEAGHELRYREPVTGNLPTTASRNDRDTRGATEAHAFYIDDRIDIGKWTITPGVRYE
MIDTAQNNNLTNARYQGDYSTALPALNVLYHLTDTWNLYANTEGSFGSVQYSQMPNRVTGDEVKPEKARTWELGTRYDNG
NLRAEIGAFLINFDNQYDSNQTNDTVIARGETRHQGIETSVNYALEGLSPVLAGYDVYASYAFVDATIREDGPNKGNRVP
FSSKHKGTMGVSYTEGPWKLNFDSSFQSDQFADNANTAAESADGSTGKIPGYMLFSTRANYDFGPQLSDLNVAVGMKNIF
NRQYYTRSFDDNNRGKYVGEPRTVYVQTSVAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPPH_1091 YP_273360.1 iron(III) dicitrate transport protein fecA VFG1047 Protein 0.0 64