|
Name : PSPPH_1255 (PSPPH_1255) Accession : YP_273517.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : transketolase, C-terminal subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3958 EC number : - Position : 1461361 - 1462380 bp Length : 1020 bp Strand : - Note : identified by match to protein family HMM PF02779; match to protein family HMM PF02780 DNA sequence : ATGAGCTCTGCCAATAACACCTCGGCTCCGTCCGTTGCACCGAAGAAAAAACTCACTACCTCGGCGATGATCGCGTCTAT CGCGTCCGAGGGTCAGGCCACTCGCCCGGCTCCGTTCGGCCATGCATTGGCGGCGCTCGCGGAGCAACGTCAGGATATCG TCGGGCTGTCGGCTGACCTGTCGAAATACACCGACCTGCACATCTTCGCCAAAGCGCACCCTGAACGTTTCTACCAAATG GGCATGGCCGAACAATTGCTGATGAGCGCGGCTGCGGGCATGGCTCGGGAAGGCTTCGTACCGTTTGCGACCACTTATGC GGTGTTCGCCTCACGTCGCGCCTACGACTTCATCTGCATGGCGATTGCCGAGGACAACCTAAACGTCAAAATCGTCTGCG GCCTGCCGGGCCTGACCACCGGCTACGGCCCCAGCCATCAGGCCACCGATGACCTGGCGATCTTTCGCGCCATGCCCAAC CTGATGATCGTCGACCCCTGTGATGCACTGGAAATAGAACAGGCGGTCCCTGCGATCGCAGCGCATCAGGGCCCGGTGTA CATGCGCCTGCTGCGCGGTAACGTGCCCTTGGTGCTGGACGAATATGGTTACACATTCGAGATCGGCAAAGCCAAGACCC TGCGCACCGGCAACGACGTGCTGATCATCTCCACCGGCCTGATGACCATGCGTGCCCTGGAAGCGGCCAAGGCACTCCAG GCCGACGGTGTCGATGTTGCAGTGCTGCACGTGCCGACCATCAAGCCGCTGGACGAGCAGACCATTCTGGCTGAAGCCAG AAAACCGGGCCGTTTGGTGGTGACCGCCGAAAACCACTCGATTATCGGCGGGCTGGGCGAAGCAGTGGCGACGGTGTTGC TGCGCAATGGCGTTACACCGACCTTCAGGCAGATCGCCCTGCCGGACGCTTTTCTCGACGCTGGAGCGCTGCCTACACTG CATGATCGTTATGGCATTTCCACGCCCGCCGTCTGTACGCAAATCAAGGCGTGGCTTTAA Protein sequence : MSSANNTSAPSVAPKKKLTTSAMIASIASEGQATRPAPFGHALAALAEQRQDIVGLSADLSKYTDLHIFAKAHPERFYQM GMAEQLLMSAAAGMAREGFVPFATTYAVFASRRAYDFICMAIAEDNLNVKIVCGLPGLTTGYGPSHQATDDLAIFRAMPN LMIVDPCDALEIEQAVPAIAAHQGPVYMRLLRGNVPLVLDEYGYTFEIGKAKTLRTGNDVLIISTGLMTMRALEAAKALQ ADGVDVAVLHVPTIKPLDEQTILAEARKPGRLVVTAENHSIIGGLGEAVATVLLRNGVTPTFRQIALPDAFLDAGALPTL HDRYGISTPAVCTQIKAWL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96118.1 | transketolase | Not tested | T-PAI | Protein | 2e-127 | 95 |
| unnamed | AAT96057.1 | transketolase | Not tested | T-PAI | Protein | 4e-151 | 95 |
| unnamed | AAT96101.1 | transketolase | Not tested | T-PAI | Protein | 3e-153 | 95 |
| unnamed | AAT96230.1 | transketolase | Not tested | T-PAI | Protein | 3e-110 | 94 |
