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Name : hrpW1 (PSPPH_1264) Accession : YP_273524.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type III helper protein HrpW1 Function : - COG functional category : - COG ID : - EC number : - Position : 1472985 - 1474181 bp Length : 1197 bp Strand : - Note : identified by match to protein family HMM PF03211 DNA sequence : ATGAGCATCGGTATCACCCCCACACCCTACCAACCCACGTCAGCCGCGCTGGACTTCTCGGCGCTGAGTGAAAAAAGCCC GCAGACAAACACCTTCCACGATGAGAACGCCCCACAGGCCGTAGACGCTGGTGCCATGCTGTTCAACAGCGCCGCACCGA AAAACGTCAGTTTCGGGCAACCTGACAACAGCGTGCAGAGCCCGCAGGATGCCAACAACACAGCAAACCCCGAGTCCAAC CTCATCAAGCTGTTCAGTGCATTGATTGTTTCACTGCTGCAGATGCTCATGAACCTTAATAAAAAACAGGACACAGATCA GGACTCGAGCGAGTGGCAGGACCCTTTTCAGAACAATGGCGGGCTCGGTACGCCTTCAACCGATAGCGGGGACAGCGGTG ACGGCAGTACGCTAGCCGCAACGGGCGATGGCGGCGGCGATACACCCACTGCAACAGGTGGCAACACGCCTTCTGTCGAA GGCAGCAGCGAGAACGATGATGGCGTAACACCGCAACTGGCCAACCCCAACCATACCTCAGGCACGGGTCCGGTTTCGGA TACAGCGGGCGCCAACGACCAGGCAGGCAAGGTAATTGTGGTGAAAGACACCATCAAAGTCGCTGCCAACACAGTCTATG ACGCACACGGCGCAACCTTCACCGCCGACAAGTCGATGGGTAACGGAGACCAGAGCGAAAACCAGAAGCCTTTGTTCGAA CTGGCAGAAGGCGCCACCTTGAAAAACGCTAACCTGGGTGAGAACGAAGTGGATGGCATACACGTGAAAGCCAAGGACGC CCAGCAAGTCACCATCGATAACGTGCACGCCGAAAACGTCGGGGAGGACATGATCACCGTCAAGGGCGAGGGAGGCGCAA AGGTAACCAATCTGCAAATCAAAAACAGCAGTGCTGAAAACGCAGACGATAAGGTTTTCCAACTTAACGCGAACACTCAT TTGAACATCACTGGTTTCGAAGCCAACAATTTCGGAACGCTGGTTCGAACCAATGGTGAAAAGCAGTTTGATGACATGAA TATCAAGCTGGACGGTGTAGACGCTAATCACGGCAAGTTCGCACTGGTAAAAAGCGACAGCGAAGACCTGCAGCTGGAGA CCAGCAACATCGCCATGACCGATGTCAAACATGCCTATGATAAAACCAAGGCCTCGACCCAACACACAGAGCTTTGA Protein sequence : MSIGITPTPYQPTSAALDFSALSEKSPQTNTFHDENAPQAVDAGAMLFNSAAPKNVSFGQPDNSVQSPQDANNTANPESN LIKLFSALIVSLLQMLMNLNKKQDTDQDSSEWQDPFQNNGGLGTPSTDSGDSGDGSTLAATGDGGGDTPTATGGNTPSVE GSSENDDGVTPQLANPNHTSGTGPVSDTAGANDQAGKVIVVKDTIKVAANTVYDAHGATFTADKSMGNGDQSENQKPLFE LAEGATLKNANLGENEVDGIHVKAKDAQQVTIDNVHAENVGEDMITVKGEGGAKVTNLQIKNSSAENADDKVFQLNANTH LNITGFEANNFGTLVRTNGEKQFDDMNIKLDGVDANHGKFALVKSDSEDLQLETSNIAMTDVKHAYDKTKASTQHTEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpW | AAT96222.1 | HrpW | Virulence | T-PAI | Protein | 1e-77 | 49 |
| hrpW | AAT96168.1 | HrpW | Not tested | T-PAI | Protein | 7e-77 | 48 |
